Gene detail information of Glyur000795s00031105.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G68920.36.00E-83basic helix-loop-helix (bHLH) DNA-binding superfamily protein
NRXP_006573185.10PREDICTED: transcription factor bHLH49-like isoform X3 [Glycine max]
Swissprottr|Q9CAA9|BH049_ARATH3.00E-104Transcription factor bHLH49
trEMBLtr|K7K2A6|K7K2A6_SOYBN0Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA01G09400.3}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold007951137516081-


Gene family

Gene familysubfamily
Transcription Factors FamilybHLH


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

molecular_function

GO:0046983  protein dimerization activity



Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000795s00031105.1PF00010.21HLH3724202.10E-06


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control10.156
SRR1783600control10.267
SRR1783602moderate drought stress18.909
SRR1811619moderate drought stress18.779

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain23.777
DRR006520Root Summer glycyrrhizin high producing strain23.171
DRR006521Root Winter glycyrrhizin high producing strain27.028
DRR006522Root Winter glycyrrhizin high producing strain26.218
DRR006523Root Summer glycyrrhizin low producing strain14.710
DRR006524Root Summer glycyrrhizin low producing strain14.778
DRR006525Leaf Summer glycyrrhizin high producing strain10.391
DRR006526Leaf Summer glycyrrhizin high producing strain10.438

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)30.936
SRR2868004Drought Stress(Tissue:root)31.789
SRR2967015Control (Tissue:root)41.825

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave8.761
SRR9715740Leave11.048
SRR9715741Leave12.247
SRR9715739Root3.650
SRR9715742Root17.148
SRR9715743Root13.591

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h12.789
SRR8749028MeJA induced 9h9.103
SRR8749029MeJA induced 9h5.656
SRR8749030Uninduced9.159
SRR8749031Uninduced4.620
SRR8749032Uninduced3.630

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root20.750
SRR8400027Control-Root24.422

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved