Gene detail information of Glyur000797s00025490.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G67440.1 | 5.00E-19 | Minichromosome maintenance (MCM2/3/5) family protein |
| NR | XP_008445496.1 | 1.22E-20 | PREDICTED: uncharacterized protein LOC103488495 [Cucumis melo] |
| COG | YP_007120178.1 | 1.00E-11 | ribosome small subunit-dependent GTPase A [Microcoleus sp. PCC 7113] |
| trEMBL | tr|A0A067GQC4|A0A067GQC4_CITSI | 1.00E-20 | Uncharacterized protein {ECO:0000313|EMBL:KDO81933.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00797 | 13464 | 13697 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| K06949 | rsgA, engC | EC:3.6.1.- 3.1.3.100 | Thiamine metabolism | map00730 |
Gene OntologyNot hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.102 |
| SRR1783600 | control | 0.000 |
| SRR1783602 | moderate drought stress | 0.067 |
| SRR1811619 | moderate drought stress | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.313 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.396 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 0.000 |
| SRR2868004 | Drought Stress(Tissue:root) | 0.164 |
| SRR2967015 | Control (Tissue:root) | 0.354 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 0.214 |
| SRR9715740 | Leave | 0.111 |
| SRR9715741 | Leave | 0.272 |
| SRR9715739 | Root | 0.236 |
| SRR9715742 | Root | 0.425 |
| SRR9715743 | Root | 0.418 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 0.044 |
| SRR8400027 | Control-Root | 0.140 |