Gene detail information of Glyur000797s00025507.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT5G13000.10glucan synthase-like 12
NRXP_004491686.10PREDICTED: callose synthase 3-like [Cicer arietinum]
Swissprottr|Q9LXT9|CALS3_ARATH0Callose synthase 3
trEMBLtr|G7KWP5|G7KWP5_MEDTR0Glucan synthase-like protein {ECO:0000313|EMBL:AES77225.2}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00797107847112341-


Gene family

Gene familysubfamily
Carbohydrate-Active enzymes FamilyGT48


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0006075  (1->3)-beta-D-glucan biosynthetic process


cellular_component

GO:0000148  1,3-beta-D-glucan synthase complex

GO:0016020  membrane


molecular_function

GO:0003843  1,3-beta-D-glucan synthase activity

"

Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000797s00025507.1PF02364.10Glucan_synthase81934.20E-86


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control20.886
SRR1783600control20.998
SRR1783602moderate drought stress11.770
SRR1811619moderate drought stress11.956

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain24.373
DRR006520Root Summer glycyrrhizin high producing strain24.108
DRR006521Root Winter glycyrrhizin high producing strain2.311
DRR006522Root Winter glycyrrhizin high producing strain2.085
DRR006523Root Summer glycyrrhizin low producing strain14.856
DRR006524Root Summer glycyrrhizin low producing strain14.586
DRR006525Leaf Summer glycyrrhizin high producing strain8.914
DRR006526Leaf Summer glycyrrhizin high producing strain9.047

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)53.705
SRR2868004Drought Stress(Tissue:root)30.461
SRR2967015Control (Tissue:root)33.725

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave10.719
SRR9715740Leave5.038
SRR9715741Leave4.798
SRR9715739Root5.582
SRR9715742Root18.931
SRR9715743Root18.040

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h49.600
SRR8749028MeJA induced 9h27.527
SRR8749029MeJA induced 9h31.839
SRR8749030Uninduced4.041
SRR8749031Uninduced3.318
SRR8749032Uninduced8.608

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root45.956
SRR8400027Control-Root50.418

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved