Gene detail information of Glyur000798s00031092.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT2G36460.10Aldolase superfamily protein
NRKEH42090.10fructose-bisphosphate aldolase [Medicago truncatula]
COGYP_002602040.11.00E-124hypothetical protein HRM2_07620 [Desulfobacterium autotrophicum HRM2]
Swissprottr|O65735|ALF_CICAR0Fructose-bisphosphate aldolase, cytoplasmic isozyme
trEMBLtr|A0A072VVG3|A0A072VVG3_MEDTR0Fructose-bisphosphate aldolase {ECO:0000256|RuleBase:RU003994}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold007982818332482-


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K01623ALDO EC:4.1.2.13 Carbon metabolism map01200
Biosynthesis of amino acidsmap01230
Glycolysis / Gluconeogenesismap00010
Pentose phosphate pathwaymap00030
Fructose and mannose metabolismmap00051
Carbon fixation in photosynthetic organismsmap00710
Methane metabolismmap00680


Gene Ontology

biological_process

GO:0006096  glycolytic process


molecular_function

GO:0003824  catalytic activity

GO:0004332  fructose-bisphosphate aldolase activity


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000798s00031092.1PF00274.14Glycolytic113582.10E-169


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control13.519
SRR1783600control13.535
SRR1783602moderate drought stress4.045
SRR1811619moderate drought stress3.519

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain4.684
DRR006520Root Summer glycyrrhizin high producing strain4.600
DRR006521Root Winter glycyrrhizin high producing strain2.370
DRR006522Root Winter glycyrrhizin high producing strain2.379
DRR006523Root Summer glycyrrhizin low producing strain0.828
DRR006524Root Summer glycyrrhizin low producing strain1.212
DRR006525Leaf Summer glycyrrhizin high producing strain5.721
DRR006526Leaf Summer glycyrrhizin high producing strain5.974

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)16.186
SRR2868004Drought Stress(Tissue:root)14.153
SRR2967015Control (Tissue:root)13.175

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave20.276
SRR9715740Leave17.216
SRR9715741Leave19.809
SRR9715739Root25.523
SRR9715742Root30.575
SRR9715743Root29.520

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h35.898
SRR8749028MeJA induced 9h107.129
SRR8749029MeJA induced 9h61.424
SRR8749030Uninduced214.634
SRR8749031Uninduced236.621
SRR8749032Uninduced257.436

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root31.818
SRR8400027Control-Root22.933

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved