Gene detail information of Glyur000798s00031099.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT5G03720.12.00E-74heat shock transcription factor A3
NRXP_007145255.10hypothetical protein PHAVU_007G223400g [Phaseolus vulgaris]
Swissprottr|Q8GYY1|HSFA3_ARATH3.00E-94Heat stress transcription factor A-3
trEMBLtr|V7BH71|V7BH71_PHAVU0Uncharacterized protein {ECO:0000313|EMBL:ESW17249.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold007988776290555-


Gene family

Gene familysubfamily
Transcription Factors FamilyHSF


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
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Gene Ontology

biological_process

GO:0006355  regulation of transcription, DNA-templated

GO:0009408  response to heat


cellular_component

GO:0005634  nucleus


molecular_function

GO:0003700  transcription factor activity, sequence-specific DNA binding

GO:0043565  sequence-specific DNA binding

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Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000798s00031099.1PF00447.12HSF_DNA-bind511391.80E-25


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control2.607
SRR1783600control2.428
SRR1783602moderate drought stress1.103
SRR1811619moderate drought stress1.112

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain15.061
DRR006520Root Summer glycyrrhizin high producing strain15.662
DRR006521Root Winter glycyrrhizin high producing strain3.073
DRR006522Root Winter glycyrrhizin high producing strain2.875
DRR006523Root Summer glycyrrhizin low producing strain38.119
DRR006524Root Summer glycyrrhizin low producing strain37.986
DRR006525Leaf Summer glycyrrhizin high producing strain16.939
DRR006526Leaf Summer glycyrrhizin high producing strain16.817

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)3.517
SRR2868004Drought Stress(Tissue:root)2.528
SRR2967015Control (Tissue:root)6.754

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave8.133
SRR9715740Leave6.705
SRR9715741Leave6.666
SRR9715739Root3.037
SRR9715742Root6.388
SRR9715743Root5.383

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h6.958
SRR8749028MeJA induced 9h9.670
SRR8749029MeJA induced 9h8.045
SRR8749030Uninduced4.483
SRR8749031Uninduced3.332
SRR8749032Uninduced4.052

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root2.845
SRR8400027Control-Root6.063

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved