Gene detail information of Glyur000798s00031100.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT5G03730.20Protein kinase superfamily protein
NRXP_004497601.10PREDICTED: serine/threonine-protein kinase CTR1-like [Cicer arietinum]
COGYP_001958461.17.00E-45hypothetical protein Aasi_1443 [Candidatus Amoebophilus asiaticus 5a2]
Swissprottr|Q05609|CTR1_ARATH0Serine/threonine-protein kinase CTR1
trEMBLtr|V7BJN3|V7BJN3_PHAVU0Uncharacterized protein {ECO:0000313|EMBL:ESW17250.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold0079895354105200-


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:2.1.3


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K14510CTR1 EC:2.7.11.1 MAPK signaling pathway - plant map04016
Plant hormone signal transductionmap04075


Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000798s00031100.1PF14381.1EDR11873957.50E-72
Glyur000798s00031100.1PF07714.12Pkinase_Tyr5748277.60E-72


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control19.689
SRR1783600control20.023
SRR1783602moderate drought stress18.450
SRR1811619moderate drought stress18.582

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain17.725
DRR006520Root Summer glycyrrhizin high producing strain17.812
DRR006521Root Winter glycyrrhizin high producing strain49.526
DRR006522Root Winter glycyrrhizin high producing strain48.757
DRR006523Root Summer glycyrrhizin low producing strain23.893
DRR006524Root Summer glycyrrhizin low producing strain23.980
DRR006525Leaf Summer glycyrrhizin high producing strain13.879
DRR006526Leaf Summer glycyrrhizin high producing strain13.779

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)38.056
SRR2868004Drought Stress(Tissue:root)46.205
SRR2967015Control (Tissue:root)52.883

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave19.530
SRR9715740Leave18.097
SRR9715741Leave24.240
SRR9715739Root11.178
SRR9715742Root25.865
SRR9715743Root22.600

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h33.853
SRR8749028MeJA induced 9h46.233
SRR8749029MeJA induced 9h29.404
SRR8749030Uninduced32.989
SRR8749031Uninduced26.436
SRR8749032Uninduced27.055

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root47.440
SRR8400027Control-Root41.402

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved