Gene detail

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Gene detail information of Glyur000799s00036485.1

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT2G37710.1	1.00E-75	receptor lectin kinase
NR	XP_004492168.1	4.70E-145	PREDICTED: L-type lectin-domain containing receptor kinase IV.1-like [Cicer arietinum]
COG	YP_003890765.1	1.00E-13	legume lectin beta domain-containing protein [Cyanothece sp. PCC 7822]
Swissprot	tr\|Q9M345\|LRK42_ARATH	5.00E-99	L-type lectin-domain containing receptor kinase IV.2 (Precursor)
trEMBL	tr\|I1KK20\|I1KK20_SOYBN	4.00E-144	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GLYMA07G16260.1}

Sequence

Transcript Sequence

>Glyur000799s00036485.1
ATGTCTCCCAAGCTTGTTGCACTAGTAGTATCTTTGCTGGTGACATTGGTAGTAGCCAGTGAAGATAGCACTTTCACCTATAATGGGTTCCAATCATCTCATTTGTATCTTGATGGTAGTGCTGAGTTAACCCCCAATGGCCTACTTAGACTCACCAATGACACCAAGCAACAAAAGGGTCATGCTTTCTACCAAAATGCTATAGCTTTCAAGAACAGTTCCTTCAATGGAAGTGTGTCTTCTTTCTCCACTACTTTTGTGTTTGCCATAAGATCTGAGTATCCAAATCTGAGTGGCCATGGAATTGTTTTTGTGGTTTCTCCAGCAAAAGGGCTTCCGGGTTCTCTCCCAAGCCAGTACCTTGGCCTCTTCAATGAAACAAACAATGGCAACAACAGCAACCATGTTTTTGGCATGGAATTGGATACAATTGAGAACAGTGAGTTTGGTGATATCAATGACAACCATGTTGGAATTGATATCAATGGGTTGAAGTCAGCTAAATCAGCTCCTGCAGGATATTACAGTGCTGGTGGTGAGTTCAAGAATTTGAGCCTTTTCAGTGGCAACCCAATGCAGGTGTGGGTTGAATATGATGGGGTAAAGAAGCAGATTGATGTTACTTTAGCTCCAATCAACACTGGTAAACCAGAAAACCCTTTGTTATCATTGACCAAAGATCTTTCTTCAGTTCTGAACAATAGCATGTATGTTGGATTCTCATCCTCTACTGGGTCAGTTCTAACTTCCCATTATATCCTTGGTTGGAGCTTCAAGATCAATGGCAAGGCTCAAGAACTTGTAATCTCCGAACTTCCCAAGCTACCTACACTAGGTAAGGCCACTACAAGCTCTGATGTGTTTTCCTTTGGTGCATTTCTGCTGGAGGTTGCTTGTGGTAGGAGGCCAATAGAGCAAGTAAGGGGAAGTGAGAGTGCAATTCTGGTTGATTGGGTGTATGATTGCTGGAAAAGAGGTGATATTGTTGAGGCAAAGGACCCAAATTTGGGGACAGATCATTGTATGTCAGAGGAGGTTGAACTTGTGTTGAAGCTTGGTTTGTTGTGCTCACACTCAGAGCCTTTGGCTAGGCCAAGCATGCGCCAAGTTGTGAGGTATTTGGAGAGGGATGTNCCTCTTCCTGATTTGTCTTTTCTTAGCTTATCTTCCACTGGCTTGACTTTTGGGCAGCATGGAAATGTTCAGGACTTTCCAATGTCATGTCCATCTTCTTTGGATAGGCCATTCTCTCATACTTCTTCAATTGCTGAATCACTTCTCTCTGGTGGTCGTTGAGTTTCACAAGGCACATGAAAATGGGCATTGACTATCTCATTGTAGTTGATTTGTTTTCCTATTCTTAATTGGTCTATTTATTATTTGATTTTGTATTAGATATATGAGTTATTTTTTTTTGGTATTAGATATATGAGTTACAAGTGTAATAGGTATATGAGAACTTATTTTT

Protein Sequence

Location information(JBrowse)

Scaffold	Start	End	Strand
Scaffold00799	5697	8241	-

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

molecular_function

GO:0016772 transferase activity, transferring phosphorus-containing groups

GO:0030246 carbohydrate binding

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000799s00036485.1	PF00139.14	Lectin_legB	22	259	6.10E-85

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	0.569
SRR1783600	control	0.625
SRR1783602	moderate drought stress	0.665
SRR1811619	moderate drought stress	0.716

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	0.626
DRR006520	Root Summer glycyrrhizin high producing strain	0.449
DRR006521	Root Winter glycyrrhizin high producing strain	0.000
DRR006522	Root Winter glycyrrhizin high producing strain	0.000
DRR006523	Root Summer glycyrrhizin low producing strain	0.375
DRR006524	Root Summer glycyrrhizin low producing strain	0.117
DRR006525	Leaf Summer glycyrrhizin high producing strain	2.631
DRR006526	Leaf Summer glycyrrhizin high producing strain	2.164

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress(Tissue:root)	1.156
SRR2868004	Drought Stress(Tissue:root)	3.132
SRR2967015	Control (Tissue:root)	1.064

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leave	5.965
SRR9715740	Leave	4.622
SRR9715741	Leave	10.789
SRR9715739	Root	0.395
SRR9715742	Root	1.926
SRR9715743	Root	1.409

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	0.073
SRR8749028	MeJA induced 9h	0.045
SRR8749029	MeJA induced 9h	0.207
SRR8749030	Uninduced	0.866
SRR8749031	Uninduced	0.000
SRR8749032	Uninduced	0.019

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment-Root	1.338
SRR8400027	Control-Root	1.954