Gene detail information of Glyur000799s00036488.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT3G55550.10Concanavalin A-like lectin protein kinase family protein
NRKEH22962.10L-type lectin-domain receptor kinase S.4 [Medicago truncatula]
COGYP_004571825.15.00E-21serine/threonine protein kinase [Microlunatus phosphovorus NM-1]
Swissprottr|Q9M2S4|LRKS4_ARATH0L-type lectin-domain containing receptor kinase S.4 (Precursor)
trEMBLtr|A0A072U009|A0A072U009_MEDTR0L-type lectin-domain receptor kinase S.4 {ECO:0000313|EMBL:KEH22962.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold007992250524574-


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:1.11.1


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
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Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups

GO:0030246  carbohydrate binding


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000799s00036488.1PF00139.14Lectin_legB252645.70E-81
Glyur000799s00036488.1PF00069.20Pkinase3475594.40E-45


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control5.945
SRR1783600control5.772
SRR1783602moderate drought stress5.521
SRR1811619moderate drought stress5.558

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain9.445
DRR006520Root Summer glycyrrhizin high producing strain9.372
DRR006521Root Winter glycyrrhizin high producing strain7.624
DRR006522Root Winter glycyrrhizin high producing strain7.354
DRR006523Root Summer glycyrrhizin low producing strain7.687
DRR006524Root Summer glycyrrhizin low producing strain7.728
DRR006525Leaf Summer glycyrrhizin high producing strain2.691
DRR006526Leaf Summer glycyrrhizin high producing strain2.643

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)13.081
SRR2868004Drought Stress(Tissue:root)20.243
SRR2967015Control (Tissue:root)14.986

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave2.607
SRR9715740Leave3.132
SRR9715741Leave3.209
SRR9715739Root6.544
SRR9715742Root10.736
SRR9715743Root10.471

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h3.100
SRR8749028MeJA induced 9h2.041
SRR8749029MeJA induced 9h1.072
SRR8749030Uninduced2.951
SRR8749031Uninduced0.947
SRR8749032Uninduced0.752

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root8.789
SRR8400027Control-Root10.414

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved