Gene detail

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Gene detail information of Glyur000799s00036490.1

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT2G37730.1	2.00E-158	Protein of unknown function (DUF604)
NR	KEH22967.1	0	transferring glycosyl group transferase [Medicago truncatula]
trEMBL	tr\|A0A072U016\|A0A072U016_MEDTR	0	Transferring glycosyl group transferase {ECO:0000313\|EMBL:KEH22967.1}

Sequence

Transcript Sequence

>Glyur000799s00036490.1
ATGTCTTCTCCTTCTGTGGAATATTCACTTCGAGACCTTCTCAACAAGCCATGGAAAACNCTTCTCTTCCCCACCATCAAACCCACCGATCTTCTCTCTTTCTTCCTCAAACTGGGTCTCGCCATTTCCACCCTCTTCCTCATCTCCCACTTCTTCTACCTCTCTCTTTCCTACCACCAACAACCCCAAAAACAACACTACTACGACCAAACATCCTTAAAACAAATGTTCCAACGCCGCACCCCCACCGTCACCACCGTACATGGCGGCTACGGAGGTGAAGAGCCCACACCCACCAACATCTCCCACATCCTTTTCGGGATCAGCGGCTCCACAGCCACCTGGCACACGCGTCGCCACTACACGGAGCTCTGGTGGCGCCTGGGCGCCACCGGAGGCTTCGTGTGGCTGGAAAAGGAGCCGTTGGCAAACGAGACGTGGCCGGAGACCTCCCCGCCATTCAGGGTCTCCGGCAACACGTCTTCGTTCAAGTACACGTGCTGGTACGGCTCCCGGTCNGCGATTCGCATAGCGCGGATAGTGAAAGAGAGCTTCGAGCTTGGGTTGGACAATGTGAGGTGGTTCGTGATGGNTGACGANGACACCGTGTTCTTCCCCGACAACCTCGTCACGGTGCTGTCCAAATATGACCACAANCAAATGTACTACGTTGGCGGGAATTCGGAGAGTGTGGAGCAGGATGTGATACACTTCTATAACACGGCCTATGGCGGTGGAGGATTTGCTATAAGCTACCCTTTAGCGGCGGAGCTTGTCAAGATTTTGGACGGTTGCATTGATCGATATGCTCGGTACTATGGTTCTGATCAGAAAATTCAGAGTTGTATNAGTGAGATTGGTGTTCAGATAACCAAAGAGCCTGGTTTTCATCAGGTCGATATACGTGGGAACCCATATGGGTTATTGGCGGCGCACCCGGTAGCACCACTGGTGTCGTTACATCACTTGGACTACGTGGACCCAATTTTCCCCAACATGACCCGGATTGACTCCGTGAGGAAGTTGGTAATGGCTTACAAAACGGATCCGGGTCGGACCTTGCAGCGGAGTTTCTGCTACGACCCAAAACGGAATTGGTCAGTGTCGGTGTCGTGGGGCTACAGCGTTGAGCTGTATCCCTTTCTACCAACCGCCAGGGAGCTTGAAACGGCATTCAAGACGTTCAAGACATGGCGGAGTAGGAGCGATGGCCCGTTCACGTTCAACACCAGACCCGTTAACAGTGACCCGTGTGGAAAGCCCATATTGTATTTCCTGGATCGGGTTGATAACGTGGGCGGGGGACAGACCCGATCTAGTTACAAAAGATACGTCGACGTTTCGGGAAAAGAATGTGAGCGCCTTGATTACGCCCCGGCTTTGGCGGTTCAAAACGTCGACGTTTCTGCACCTCAATTTATGCCGCACTTGTGGAGAAAGCAACAGACTTCAATTCCATGGAAACTCCTTGTCTTCTTTAGCGTAGCTCTCGCCACTTCCCTCCTTTTGTTCATCTCTCTCCCCCTCTCCACCGATTTCCACAACAAACCATTCATCCACTTGTTCAACGCCAAACCATCAACAACAACACCTTTCAGGCCTCCACCGCCGGCGAAGAAGAACCCACCACCAACATCTCCCACATCTTCTTCGGCATCGCCGGTTCCGTCAAGACGTGGCCGAAGCGCCGCCCCTACGTCGACCTCTGGTGGCAACCGAATGTCACCAGAGGCTTCCTCTGGATGGACCAGGGCCGCCGGAAAACGAGACGTGCCGGAGACTTCACCGCCGTTCAGAGTCTCCGGCAACACCTCGTCGTTCAAGTACACCTGCAGGTACGGTAACCGGTCAGCTGTTCGCATAGCGCGCATAGTGAAGGAGACCTTCGAGTTAGTGGGGCCCCACAACAACAACGTGAGGTGGTTCGTGATGGGTGACGATGACACCGTGTTCTTCCCCGACAACCTCGTCACGGTTCTGTCGAAATATGATCACAACCAGATGTACTATGTCGGCGCGAACTCCGAGAGTGTGGAACAGGACGCGATATTCTCCTACGCCGTGGCGTACGGCGGTGGAGGGTTCGCCGTCAGTTACCCTTTGGCGGCGGAGCTTGCTAGAATCTTGGACGGTTGCATAGACCGTTACGCCCAACTCTACGGCGGTGACCAGAAGGTTCAGGCTTGCATCAGTGAGATTGGCGTGCCATTGACCAAAGAGCTTGGCTTTCATCAACAACAGACTTCAATTCCATGGAAACTCCTTGTCTTCTTTAGCGTAGCTCTCGCCACTTCCCTCCTTTTGTTCATCTCTCTCCCCCTCTCCACCGATTTCCACAACAAACCATTCATCCACTTGTTCAACGCCAAACCATCAACAACAACACCTTTCAGGCCTCCACCGCCGGCGAAGAAGAACCCACCACCAACATCTCCCACATCTTCTTCGGCATCGCCGGTTCCGTCAAGACGTGGCCGAAGCGCCGCCCCTACGTCGACCTCTGGTGGCAACCGAATGTCACCAGAGGCTTCCTCTGGATGGACCAGGGCCGCCGGAAAACGAGACGTGCCGGAGACTTCACCGCCGTTCAGAGTCTCCGGCAACACCTCGTCGTTCAAGTACACCTGCAGGTACGGTAACCGGTCAGCTGTTCGCATAGCGCGCATAGTGAAGGAGACCTTCGAGTTAGTGGGGCCCCACAACAACAACGTGAGGTGGTTCGTGATGGGTGACGATGACACCGTGTTCTTCCCCGACAACCTCGTCACGGTTCTGTCGAAATATGATCACAACCAGATGTACTATGTCGGCGCGAACTCCGAGAGTGTGGAACAGGACGCGATATTCTCCTACGCCGTGGCGTACGGCGGTGGAGGGTTCGCCGTCAGTTACCCTTTGGCGGCGGAGCTTGCTAGAATCTTGGACGGTTGCATAGACCGTTACGCCCAACTCTACGGCGGTGACCAGAAGGTTCAGGCTTGCATCAGTGAGATTGGCGTGCCATTGACCAAAGAGCTTGGCTTTCATCAAGTTGATATACGCGGGAATCCATTTGGGTTGCTAGCAGCGCACCCAGTGGCGCCGCTGGTGTCGCTACACCACTTGGAAACGGTGGATCAATTGTTTCCAAGCCTGACCAAGCTTGAGTCCATCAAAAAGTTGGTTGGAGCATATAAGATGGACCCGGGTCGGGTACTGGAGCACACCTTTTGCTACGACACGAAACGGAATTGGTCGGTTTCAGTGTCATGGGGACACAGCGTGCAGTTGTATCTGTCGTTGGTCACGGCAATGGAGCTGGAGAGGGCGGTTGGAACGTTCCAGACATGGCAGAGCTTGAGTGATGGGCCTTTTGTGTTCAACACCCGACCCGTAAGCAGCGACCCGTGTGGGAGGCCCGTTTTGTTTTTCTTGGATCGGGTCGAGAACGTGGGTGCGGGGAATACACGGTCCACGTATGTGAGGCACGTTGACGCATTGGGGAAAGAGTGCGGAAGAGTTGACTTGATTGGGGTCCTCGATGTTGTTCAGTTG

Protein Sequence

>Glyur000799s00036490.1
MSSPSVEYSLRDLLNKPWKTLLFPTIKPTDLLSFFLKLGLAISTLFLISHFFYLSLSYHQQPQKQHYYDQTSLKQMFQRRTPTVTTVHGGYGGEEPTPTNISHILFGISGSTATWHTRRHYTELWWRLGATGGFVWLEKEPLANETWPETSPPFRVSGNTSSFKYTCWYGSRSAIRIARIVKESFELGLDNVRWFVMXDXDTVFFPDNLVTVLSKYDHXQMYYVGGNSESVEQDVIHFYNTAYGGGGFAISYPLAAELVKILDGCIDRYARYYGSDQKIQSCXSEIGVQITKEPGFHQVDIRGNPYGLLAAHPVAPLVSLHHLDYVDPIFPNMTRIDSVRKLVMAYKTDPGRTLQRSFCYDPKRNWSVSVSWGYSVELYPFLPTARELETAFKTFKTWRSRSDGPFTFNTRPVNSDPCGKPILYFLDRVDNVGGGQTRSSYKRYVDVSGKECERLDYAPALAVQNVDVSAPQFMPHLWRKQQTSIPWKLLVFFSVALATSLLLFISLPLSTDFHNKPFIHLFNAKPSTTTPFRPPPPAKKNPPPTSPTSSSASPVPSRRGRSAAPTSTSGGNRMSPEASSGWTRAAGKRDVPETSPPFRVSGNTSSFKYTCRYGNRSAVRIARIVKETFELVGPHNNNVRWFVMGDDDTVFFPDNLVTVLSKYDHNQMYYVGANSESVEQDAIFSYAVAYGGGGFAVSYPLAAELARILDGCIDRYAQLYGGDQKVQACISEIGVPLTKELGFHQQQTSIPWKLLVFFSVALATSLLLFISLPLSTDFHNKPFIHLFNAKPSTTTPFRPPPPAKKNPPPTSPTSSSASPVPSRRGRSAAPTSTSGGNRMSPEASSGWTRAAGKRDVPETSPPFRVSGNTSSFKYTCRYGNRSAVRIARIVKETFELVGPHNNNVRWFVMGDDDTVFFPDNLVTVLSKYDHNQMYYVGANSESVEQDAIFSYAVAYGGGGFAVSYPLAAELARILDGCIDRYAQLYGGDQKVQACISEIGVPLTKELGFHQVDIRGNPFGLLAAHPVAPLVSLHHLETVDQLFPSLTKLESIKKLVGAYKMDPGRVLEHTFCYDTKRNWSVSVSWGHSVQLYLSLVTAMELERAVGTFQTWQSLSDGPFVFNTRPVSSDPCGRPVLFFLDRVENVGAGNTRSTYVRHVDALGKECGRVDLIGVLDVVQL

Location information(JBrowse)

Scaffold	Start	End	Strand
Scaffold00799	37975	53315	-

Gene family

Gene family	subfamily
Carbohydrate-Active enzymes Family	GT31

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

Not hits found.

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000799s00036490.1	PF04646.7	DUF604	233	481	2.20E-100
Glyur000799s00036490.1	PF04646.7	DUF604	680	746	2.60E-32
Glyur000799s00036490.1	PF04646.7	DUF604	945	1164	1.70E-93

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	0.570
SRR1783600	control	0.638
SRR1783602	moderate drought stress	0.517
SRR1811619	moderate drought stress	0.470

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	0.421
DRR006520	Root Summer glycyrrhizin high producing strain	0.409
DRR006521	Root Winter glycyrrhizin high producing strain	0.000
DRR006522	Root Winter glycyrrhizin high producing strain	0.000
DRR006523	Root Summer glycyrrhizin low producing strain	0.177
DRR006524	Root Summer glycyrrhizin low producing strain	0.141
DRR006525	Leaf Summer glycyrrhizin high producing strain	3.478
DRR006526	Leaf Summer glycyrrhizin high producing strain	3.500

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress(Tissue:root)	1.018
SRR2868004	Drought Stress(Tissue:root)	0.816
SRR2967015	Control (Tissue:root)	0.518

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leave	5.161
SRR9715740	Leave	3.690
SRR9715741	Leave	6.775
SRR9715739	Root	1.098
SRR9715742	Root	1.661
SRR9715743	Root	1.208

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	0.155
SRR8749028	MeJA induced 9h	0.089
SRR8749029	MeJA induced 9h	0.051
SRR8749030	Uninduced	0.044
SRR8749031	Uninduced	0.009
SRR8749032	Uninduced	0.017

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment-Root	1.215
SRR8400027	Control-Root	1.149