Gene detail information of Glyur000801s00027037.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT2G38090.12.00E-72Duplicated homeodomain-like superfamily protein
NRNP_001235748.11.28E-176MYB transcription factor MYB75 [Glycine max]
Swissprottr|Q8S9H7|DIV_ANTMA1.00E-82Transcription factor DIVARICATA
trEMBLtr|Q0PJK8|Q0PJK8_SOYBN5.00E-177Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA14G06750.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold008014236745370-


Gene family

Gene familysubfamily
Transcription Factors FamilyMYB-related


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

molecular_function

GO:0003677  DNA binding

GO:0003682  chromatin binding



Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000801s00027037.1PF00249.26Myb_DNA-binding1281723.20E-10


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control45.753
SRR1783600control46.062
SRR1783602moderate drought stress57.144
SRR1811619moderate drought stress57.229

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain60.334
DRR006520Root Summer glycyrrhizin high producing strain59.519
DRR006521Root Winter glycyrrhizin high producing strain24.198
DRR006522Root Winter glycyrrhizin high producing strain23.837
DRR006523Root Summer glycyrrhizin low producing strain72.875
DRR006524Root Summer glycyrrhizin low producing strain73.046
DRR006525Leaf Summer glycyrrhizin high producing strain15.430
DRR006526Leaf Summer glycyrrhizin high producing strain15.360

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)71.703
SRR2868004Drought Stress(Tissue:root)128.746
SRR2967015Control (Tissue:root)168.621

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave17.390
SRR9715740Leave26.929
SRR9715741Leave24.623
SRR9715739Root19.600
SRR9715742Root69.762
SRR9715743Root59.964

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h4.269
SRR8749028MeJA induced 9h12.124
SRR8749029MeJA induced 9h4.779
SRR8749030Uninduced3.776
SRR8749031Uninduced1.455
SRR8749032Uninduced3.330

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root72.760
SRR8400027Control-Root82.557