Gene detail information of Glyur000801s00027041.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G36280.10L-Aspartase-like family protein
NRKHN20874.10Adenylosuccinate lyase [Glycine soja]
COGYP_527147.10Adenylosuccinate lyase [Saccharophagus degradans 2-40]
trEMBLtr|I1M7Y3|I1M7Y3_SOYBN0Adenylosuccinate lyase {ECO:0000256|RuleBase:RU361172}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold008015888966177+


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K01756purB, ADSL EC:4.3.2.2 Purine metabolism map00230
Alanine, aspartate and glutamate metabolismmap00250


Gene Ontology

biological_process

GO:0006188  IMP biosynthetic process

GO:0009152  purine ribonucleotide biosynthetic process


molecular_function

GO:0003824  catalytic activity

GO:0004018  N6-(1,2-dicarboxyethyl)AMP AMP-lyase (fumarate-forming) activity


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000801s00027041.1PF00206.15Lyase_1953845.60E-54
Glyur000801s00027041.1PF08328.6ASL_C4225323.00E-49


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control14.471
SRR1783600control14.494
SRR1783602moderate drought stress17.821
SRR1811619moderate drought stress17.974

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain24.816
DRR006520Root Summer glycyrrhizin high producing strain24.358
DRR006521Root Winter glycyrrhizin high producing strain33.604
DRR006522Root Winter glycyrrhizin high producing strain33.019
DRR006523Root Summer glycyrrhizin low producing strain23.729
DRR006524Root Summer glycyrrhizin low producing strain23.169
DRR006525Leaf Summer glycyrrhizin high producing strain18.306
DRR006526Leaf Summer glycyrrhizin high producing strain18.255

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)32.211
SRR2868004Drought Stress(Tissue:root)30.227
SRR2967015Control (Tissue:root)32.569

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave24.808
SRR9715740Leave27.529
SRR9715741Leave31.304
SRR9715739Root4.265
SRR9715742Root19.822
SRR9715743Root20.111

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h28.530
SRR8749028MeJA induced 9h31.027
SRR8749029MeJA induced 9h28.498
SRR8749030Uninduced20.941
SRR8749031Uninduced24.974
SRR8749032Uninduced24.713

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root26.828
SRR8400027Control-Root22.726

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved