Gene detail information of Glyur000802s00023719.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT3G58680.12.00E-64multiprotein bridging factor 1B
NRAFK47741.13.99E-91unknown [Lotus japonicus]
Swissprottr|Q9LXT3|MBF1B_ARATH3.00E-81Multiprotein-bridging factor 1b
trEMBLtr|I3T5E9|I3T5E9_LOTJA1.00E-91Uncharacterized protein {ECO:0000313|EMBL:AFK47741.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold008022453826967+


Gene family

Gene familysubfamily
Transcription Factors FamilyMBF1


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

molecular_function

GO:0003677  DNA binding

GO:0043565  sequence-specific DNA binding



Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000802s00023719.1PF08523.5MBF1691397.70E-24
Glyur000802s00023719.1PF01381.17HTH_31471979.00E-12


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control370.497
SRR1783600control374.678
SRR1783602moderate drought stress476.023
SRR1811619moderate drought stress481.393

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain358.989
DRR006520Root Summer glycyrrhizin high producing strain360.281
DRR006521Root Winter glycyrrhizin high producing strain388.379
DRR006522Root Winter glycyrrhizin high producing strain374.170
DRR006523Root Summer glycyrrhizin low producing strain284.128
DRR006524Root Summer glycyrrhizin low producing strain284.641
DRR006525Leaf Summer glycyrrhizin high producing strain292.614
DRR006526Leaf Summer glycyrrhizin high producing strain298.984

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)317.023
SRR2868004Drought Stress(Tissue:root)285.051
SRR2967015Control (Tissue:root)297.168

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave381.361
SRR9715740Leave339.791
SRR9715741Leave381.055
SRR9715739Root108.633
SRR9715742Root199.264
SRR9715743Root162.002

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h394.087
SRR8749028MeJA induced 9h336.303
SRR8749029MeJA induced 9h389.322
SRR8749030Uninduced412.359
SRR8749031Uninduced286.959
SRR8749032Uninduced373.980

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root315.150
SRR8400027Control-Root289.249

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved