Gene detail information of Glyur000802s00023720.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT3G58690.11.00E-71Protein kinase superfamily protein
NRKHG20383.11.45E-160Inactive protein kinase [Gossypium arboreum]
COGYP_001958461.13.00E-08hypothetical protein Aasi_1443 [Candidatus Amoebophilus asiaticus 5a2]
Swissprottr|P0DH62|Y4407_SELML9.00E-45Inactive protein kinase SELMODRAFT_444075
trEMBLtr|I1LUN8|I1LUN8_SOYBN2.00E-107Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA12G33930.2}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold008022929432971+


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:1.2.1


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000802s00023720.1PF07714.12Pkinase_Tyr911732.00E-13
Glyur000802s00023720.1PF07714.12Pkinase_Tyr1782737.90E-06


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control13.119
SRR1783600control14.196
SRR1783602moderate drought stress28.840
SRR1811619moderate drought stress28.473

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain9.041
DRR006520Root Summer glycyrrhizin high producing strain8.959
DRR006521Root Winter glycyrrhizin high producing strain2.620
DRR006522Root Winter glycyrrhizin high producing strain2.799
DRR006523Root Summer glycyrrhizin low producing strain10.156
DRR006524Root Summer glycyrrhizin low producing strain9.844
DRR006525Leaf Summer glycyrrhizin high producing strain0.866
DRR006526Leaf Summer glycyrrhizin high producing strain0.832

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)16.159
SRR2868004Drought Stress(Tissue:root)14.917
SRR2967015Control (Tissue:root)21.171

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave4.971
SRR9715740Leave1.100
SRR9715741Leave2.263
SRR9715739Root8.567
SRR9715742Root8.386
SRR9715743Root9.595

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h20.030
SRR8749028MeJA induced 9h11.965
SRR8749029MeJA induced 9h12.114
SRR8749030Uninduced4.820
SRR8749031Uninduced0.875
SRR8749032Uninduced1.868

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root18.644
SRR8400027Control-Root23.291

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved