Gene detail information of Glyur000802s00023722.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT5G05340.11.00E-108Peroxidase superfamily protein
NRXP_003527340.10PREDICTED: peroxidase 52-like [Glycine max]
Swissprottr|A7NY33|PER4_VITVI4.00E-135Peroxidase 4 {ECO:0000250|UniProtKB:Q42578} (Precursor)
trEMBLtr|I1KEL7|I1KEL7_SOYBN0Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA06G42850.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold008023641239812+


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K00430E1.11.1.7 EC:1.11.1.7 Phenylpropanoid biosynthesis map00940


Gene Ontology

biological_process

GO:0006979  response to oxidative stress

GO:0055114  oxidation-reduction process


molecular_function

GO:0004601  peroxidase activity

GO:0020037  heme binding


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000802s00023722.1PF00141.18peroxidase452842.40E-76


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control81.530
SRR1783600control81.418
SRR1783602moderate drought stress11.308
SRR1811619moderate drought stress11.433

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain11.865
DRR006520Root Summer glycyrrhizin high producing strain11.507
DRR006521Root Winter glycyrrhizin high producing strain31.095
DRR006522Root Winter glycyrrhizin high producing strain30.349
DRR006523Root Summer glycyrrhizin low producing strain4.988
DRR006524Root Summer glycyrrhizin low producing strain5.007
DRR006525Leaf Summer glycyrrhizin high producing strain3.101
DRR006526Leaf Summer glycyrrhizin high producing strain3.087

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)78.115
SRR2868004Drought Stress(Tissue:root)42.426
SRR2967015Control (Tissue:root)47.289

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave90.910
SRR9715740Leave6.783
SRR9715741Leave36.019
SRR9715739Root12.337
SRR9715742Root14.456
SRR9715743Root14.603

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h102.663
SRR8749028MeJA induced 9h346.047
SRR8749029MeJA induced 9h274.906
SRR8749030Uninduced501.595
SRR8749031Uninduced499.464
SRR8749032Uninduced144.248

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root86.365
SRR8400027Control-Root61.312

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved