Gene detail information of Glyur000802s00023723.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT2G30980.10SHAGGY-related protein kinase dZeta
NRXP_004487575.10PREDICTED: shaggy-related protein kinase zeta-like [Cicer arietinum]
COGYP_008149401.15.00E-23hypothetical protein SCE1572_14835 [Sorangium cellulosum So0157-2]
Swissprottr|Q39010|KSG6_ARATH0Shaggy-related protein kinase zeta
trEMBLtr|G7IM77|G7IM77_MEDTR0Shaggy-like kinase dzeta {ECO:0000313|EMBL:AES66963.2}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold008024171146174-


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:4.5.4


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K14502BIN2 EC:2.7.11.1 Plant hormone signal transduction map04075


Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000802s00023723.1PF00069.20Pkinase923731.40E-59


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control94.840
SRR1783600control94.908
SRR1783602moderate drought stress75.389
SRR1811619moderate drought stress78.631

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain60.368
DRR006520Root Summer glycyrrhizin high producing strain60.117
DRR006521Root Winter glycyrrhizin high producing strain48.542
DRR006522Root Winter glycyrrhizin high producing strain49.746
DRR006523Root Summer glycyrrhizin low producing strain48.433
DRR006524Root Summer glycyrrhizin low producing strain47.903
DRR006525Leaf Summer glycyrrhizin high producing strain27.397
DRR006526Leaf Summer glycyrrhizin high producing strain26.495

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)40.380
SRR2868004Drought Stress(Tissue:root)38.327
SRR2967015Control (Tissue:root)40.467

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave26.752
SRR9715740Leave17.200
SRR9715741Leave20.872
SRR9715739Root30.129
SRR9715742Root44.568
SRR9715743Root42.362

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h70.078
SRR8749028MeJA induced 9h60.316
SRR8749029MeJA induced 9h36.407
SRR8749030Uninduced22.630
SRR8749031Uninduced8.418
SRR8749032Uninduced9.806

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root56.080
SRR8400027Control-Root56.670

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved