Gene detail

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Gene detail information of Glyur000802s00023733.1

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT3G58710.2	1.00E-54	WRKY DNA-binding protein 69
NR	XP_004487582.1	5.79E-148	PREDICTED: probable WRKY transcription factor 69-like [Cicer arietinum]
Swissprot	tr\|Q93WV5\|WRK69_ARATH	5.00E-72	Probable WRKY transcription factor 69
trEMBL	tr\|I1LUP5\|I1LUP5_SOYBN	2.00E-146	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GLYMA12G33990.1}

Sequence

Transcript Sequence

>Glyur000802s00023733.1
AATTAATTGGAGTATTTGCTCGCACGTCCACAATAAACTACACTGCTGCCAATCTGTCACCATGGCGGCTCATATTAAACACCAACCCCAACCCTTTCTTCTCTCTCACTCTCACCCTCCTTCCCTCATCACCACCACCACCACCACCACTCCTCCGGCCACTCCCCACTTCATTTTCCGGCGAGCCCACACACCCACTCACCCTTTCCCGCACTAATTAATTACCAATTATCATAGATATATACCGATCGACACACACAAATATATATATCAAAGTTAATTGTTCGCTAGCTCTCCAACCAATCATGTACCACCGTAGTAGATTCAACACCCAACCATTGTATGTCGCTGACCCAGATGAGCCCGAGCCCATCTCAGAACCCGGGCCTGCTTCTCCTTCTTCCGGTGAAGACACTAAAACTGAAGCACCATCCCCCCAAAAAAGGAGGGAGATGAAGAAGAGGGTGGTGACGATACCGATCGGTGACGTGGATGGATCTAAGAGCAAAGGAGAGACATATCCACCGTCGGATTCGTGGGCCTGGAGGAAGTACGGCCAGAAGCCCATCAAAGGCTCCCCTTATCCCAGGGGATACTACCGATGCAGCAGTTCAAAGGGTTGCCCAGCGAGGAAGCAAGTTGAGAGAAGCCGCGTGGACCCCACAAAGCTAATCGTCACTTACGCCTACGAACACAACCACTCCCTCCCCCTNCCCAAATCCCACTCCTCCGCCGCCTCAGCCTCCACCGGCGACGGCGACGGCGCCGCTGCCTCGCCTGAAGAGTCCGCCGCNAGGTTCCAGCCGGAGGAGCTGACCGTTTTCGCCACGCAATCCGATCTCGAACTCGCCGGCGACTCGGCGGTTCTTCTCTGCCACCACCACCACGCCGAGTTCGGGTGGTTCGACGATGTGGCCTCCACCGGCGTCCTGGAAAGCCCGATCTGCGGGGAGGTGGAGGACGTGACGATGCCGATGAGGGAGGAGGATGAGTCTCTGTTCGCCGATCTTGGCGAGTTGCCGGAGTGCTCGGTGGTTTTCCGGCGGAGGAATATTCCGAGTGCCAGTGCGATTCAGTGCGGCGGCATCACAGGATAACCCGGCNGGACCTTTTTCTTTTGTCCAGCGATGCATTTGTGATATAATATTCACGGCCTGAAAATCGTGCGCTATTAAAAAAGTTCTGAATGATAAGGAAAGAATTAAATAAGTTATTTTACAAATCATGGATTTTTTTTTAATCTTGCTTTGTACATTTGAATAAATA

Protein Sequence

Location information(JBrowse)

Scaffold	Start	End	Strand
Scaffold00802	90253	93100	+

Gene family

Gene family	subfamily
Transcription Factors Family	WRKY

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process
GO:0006355 regulation of transcription, DNA-templated

molecular_function GO:0003700 transcription factor activity, sequence-specific DNA binding GO:0043565 sequence-specific DNA binding

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000802s00023733.1	PF03106.10	WRKY	75	133	7.70E-27

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	59.007
SRR1783600	control	59.403
SRR1783602	moderate drought stress	58.443
SRR1811619	moderate drought stress	58.381

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	31.309
DRR006520	Root Summer glycyrrhizin high producing strain	31.000
DRR006521	Root Winter glycyrrhizin high producing strain	29.050
DRR006522	Root Winter glycyrrhizin high producing strain	28.082
DRR006523	Root Summer glycyrrhizin low producing strain	63.057
DRR006524	Root Summer glycyrrhizin low producing strain	64.174
DRR006525	Leaf Summer glycyrrhizin high producing strain	15.109
DRR006526	Leaf Summer glycyrrhizin high producing strain	15.183

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress(Tissue:root)	120.084
SRR2868004	Drought Stress(Tissue:root)	138.843
SRR2967015	Control (Tissue:root)	116.853

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leave	65.513
SRR9715740	Leave	51.221
SRR9715741	Leave	92.577
SRR9715739	Root	89.711
SRR9715742	Root	89.348
SRR9715743	Root	84.251

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	45.362
SRR8749028	MeJA induced 9h	80.934
SRR8749029	MeJA induced 9h	69.632
SRR8749030	Uninduced	81.281
SRR8749031	Uninduced	48.704
SRR8749032	Uninduced	96.955

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment-Root	50.827
SRR8400027	Control-Root	42.550