Gene detail information of Glyur000805s00021363.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT3G05870.25.00E-43anaphase-promoting complex/cyclosome 11
NRXP_004491315.11.22E-76PREDICTED: differentially expressed in FDCP 6 homolog [Cicer arietinum]
Swissprottr|Q9M9L0|APC11_ARATH9.00E-55Anaphase-promoting complex subunit 11
trEMBLtr|I1M6Z7|I1M6Z7_SOYBN2.00E-76Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA14G03430.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold008052360927797-


Gene family

Gene familysubfamily
Ubiquitin FamilyRING


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

cellular_component

GO:0005680  anaphase-promoting complex


molecular_function

GO:0004842  ubiquitin-protein transferase activity

GO:0005515  protein binding

GO:0008270  zinc ion binding


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000805s00021363.1PF12861.2zf-Apc11231002.00E-36


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control12.502
SRR1783600control12.208
SRR1783602moderate drought stress12.039
SRR1811619moderate drought stress11.808

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain16.275
DRR006520Root Summer glycyrrhizin high producing strain15.749
DRR006521Root Winter glycyrrhizin high producing strain17.291
DRR006522Root Winter glycyrrhizin high producing strain17.147
DRR006523Root Summer glycyrrhizin low producing strain15.828
DRR006524Root Summer glycyrrhizin low producing strain17.538
DRR006525Leaf Summer glycyrrhizin high producing strain7.898
DRR006526Leaf Summer glycyrrhizin high producing strain8.330

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)13.288
SRR2868004Drought Stress(Tissue:root)14.509
SRR2967015Control (Tissue:root)13.485

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave8.299
SRR9715740Leave9.248
SRR9715741Leave8.353
SRR9715739Root4.509
SRR9715742Root6.719
SRR9715743Root5.636

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h20.325
SRR8749028MeJA induced 9h16.385
SRR8749029MeJA induced 9h12.984
SRR8749030Uninduced16.459
SRR8749031Uninduced9.765
SRR8749032Uninduced10.122

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root14.036
SRR8400027Control-Root11.922

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved