Gene detail information of Glyur000805s00021383.2 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G17900.1 | 6.00E-164 | SET domain group 37 |
| NR | XP_004500595.1 | 0 | PREDICTED: histone-lysine N-methyltransferase ASHR1-like isoform X1 [Cicer arietinum] |
| Swissprot | tr|Q7XJS0|ASHR1_ARATH | 0 | Histone-lysine N-methyltransferase ASHR1 |
| trEMBL | tr|G7J3L4|G7J3L4_MEDTR | 0 | Histone-lysine N-methyltransferase {ECO:0000313|EMBL:AES71348.2} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00805 | 110065 | 116047 | - |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | SET |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000805s00021383.2 | PF00856.23 | SET | 22 | 241 | 3.00E-12 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 5.646 |
| SRR1783600 | control | 5.651 |
| SRR1783602 | moderate drought stress | 14.407 |
| SRR1811619 | moderate drought stress | 14.502 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 7.455 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 7.416 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 2.005 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 1.762 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 13.017 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 12.721 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 6.239 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 5.984 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 7.210 |
| SRR2868004 | Drought Stress(Tissue:root) | 9.673 |
| SRR2967015 | Control (Tissue:root) | 10.237 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 10.470 |
| SRR9715740 | Leave | 14.722 |
| SRR9715741 | Leave | 10.669 |
| SRR9715739 | Root | 0.425 |
| SRR9715742 | Root | 3.510 |
| SRR9715743 | Root | 3.132 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 16.160 |
| SRR8749028 | MeJA induced 9h | 11.087 |
| SRR8749029 | MeJA induced 9h | 11.019 |
| SRR8749030 | Uninduced | 3.900 |
| SRR8749031 | Uninduced | 1.288 |
| SRR8749032 | Uninduced | 3.999 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 10.493 |
| SRR8400027 | Control-Root | 10.908 |