Gene detail information of Glyur000806s00031677.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G15540.1 | 2.00E-47 | indole-3-acetic acid inducible 19 |
| NR | AFK39785.1 | 2.07E-103 | unknown [Lotus japonicus] |
| Swissprot | tr|P13088|AUX22_SOYBN | 1.00E-100 | Auxin-induced protein AUX22 |
| trEMBL | tr|I3SHP3|I3SHP3_LOTJA | 8.00E-104 | Auxin-induced protein {ECO:0000256|RuleBase:RU004549} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00806 | 7603 | 12776 | + |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | AUX/IAA |
| EAR motif-containing Proteins | AUX/IAA |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000806s00031677.1 | PF02309.11 | AUX_IAA | 6 | 185 | 1.50E-63 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 1.084 |
| SRR1783600 | control | 0.728 |
| SRR1783602 | moderate drought stress | 0.328 |
| SRR1811619 | moderate drought stress | 0.542 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.208 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.375 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 1.097 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 1.005 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 1.050 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 1.529 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 12.632 |
| SRR2868004 | Drought Stress(Tissue:root) | 7.624 |
| SRR2967015 | Control (Tissue:root) | 14.875 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 10.285 |
| SRR9715740 | Leave | 6.454 |
| SRR9715741 | Leave | 2.431 |
| SRR9715739 | Root | 0.873 |
| SRR9715742 | Root | 1.469 |
| SRR9715743 | Root | 0.632 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 9.429 |
| SRR8749028 | MeJA induced 9h | 8.146 |
| SRR8749029 | MeJA induced 9h | 14.063 |
| SRR8749030 | Uninduced | 0.100 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.148 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 2.470 |
| SRR8400027 | Control-Root | 4.002 |