Gene detail information of Glyur000810s00032284.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT4G08850.11.00E-164Leucine-rich repeat receptor-like protein kinase family protein
NRKHN32423.10Putative LRR receptor-like serine/threonine-protein kinase [Glycine soja]
COGYP_004775215.15.00E-55RHS repeat-associated core domain-containing protein [Cyclobacterium marinum DSM 745]
Swissprottr|Q8VZG8|Y4885_ARATH0Probable LRR receptor-like serine/threonine-protein kinase At4g08850 (Precursor)
trEMBLtr|K7LSB8|K7LSB8_SOYBN0Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA12G00980.2}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold008104177345580-


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:1.12.4


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005515  protein binding

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000810s00032284.1PF08263.7LRRNT_234764.10E-09
Glyur000810s00032284.1PF00560.28LRR_11291510.21
Glyur000810s00032284.1PF00560.28LRR_14024220.027
Glyur000810s00032284.1PF13516.1LRR_64484640.56
Glyur000810s00032284.1PF00560.28LRR_14744950.64
Glyur000810s00032284.1PF13855.1LRR_85035581.80E-06
Glyur000810s00032284.1PF00069.20Pkinase6799412.80E-47


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control0.497
SRR1783600control0.464
SRR1783602moderate drought stress2.910
SRR1811619moderate drought stress2.868

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain3.980
DRR006520Root Summer glycyrrhizin high producing strain3.721
DRR006521Root Winter glycyrrhizin high producing strain2.957
DRR006522Root Winter glycyrrhizin high producing strain2.863
DRR006523Root Summer glycyrrhizin low producing strain10.734
DRR006524Root Summer glycyrrhizin low producing strain10.667
DRR006525Leaf Summer glycyrrhizin high producing strain5.027
DRR006526Leaf Summer glycyrrhizin high producing strain5.010

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)1.966
SRR2868004Drought Stress(Tissue:root)4.144
SRR2967015Control (Tissue:root)6.373

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave2.097
SRR9715740Leave1.159
SRR9715741Leave2.952
SRR9715739Root0.623
SRR9715742Root2.360
SRR9715743Root2.296

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h1.517
SRR8749028MeJA induced 9h1.261
SRR8749029MeJA induced 9h1.569
SRR8749030Uninduced1.283
SRR8749031Uninduced1.861
SRR8749032Uninduced2.559

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root1.749
SRR8400027Control-Root3.092

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved