Gene detail information of Glyur000813s00029795.2 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G18950.1 | 1.00E-180 | DDT domain superfamily |
| NR | XP_003522354.1 | 0 | PREDICTED: uncharacterized protein LOC100816258 [Glycine max] |
| trEMBL | tr|I1JX04|I1JX04_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA04G34610.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00813 | 58948 | 67684 | + |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | DDT |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene OntologyNot hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000813s00029795.2 | PF02791.12 | DDT | 118 | 167 | 0.00024 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 6.846 |
| SRR1783600 | control | 6.807 |
| SRR1783602 | moderate drought stress | 7.538 |
| SRR1811619 | moderate drought stress | 7.644 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 8.855 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 8.715 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 5.779 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 5.590 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 9.657 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 9.454 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 5.497 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 5.332 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 7.286 |
| SRR2868004 | Drought Stress(Tissue:root) | 7.524 |
| SRR2967015 | Control (Tissue:root) | 7.874 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 5.521 |
| SRR9715740 | Leave | 6.549 |
| SRR9715741 | Leave | 6.162 |
| SRR9715739 | Root | 1.263 |
| SRR9715742 | Root | 7.116 |
| SRR9715743 | Root | 5.591 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 8.263 |
| SRR8749028 | MeJA induced 9h | 9.074 |
| SRR8749029 | MeJA induced 9h | 5.000 |
| SRR8749030 | Uninduced | 5.140 |
| SRR8749031 | Uninduced | 5.671 |
| SRR8749032 | Uninduced | 3.041 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 8.570 |
| SRR8400027 | Control-Root | 7.493 |