Gene detail information of Glyur000813s00029801.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G60640.1 | 2.00E-26 | PDI-like 1-4 |
| NR | KHN38768.1 | 7.09E-39 | Protein disulfide isomerase-like 1-4 [Glycine soja] |
| Swissprot | tr|Q9FF55|PDI14_ARATH | 4.00E-31 | Protein disulfide isomerase-like 1-4 (Precursor) |
| trEMBL | tr|I1LL59|I1LL59_SOYBN | 1.00E-38 | Protein disulfide-isomerase {ECO:0000256|RuleBase:RU361130} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00813 | 106685 | 108609 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| K09580 | PDIA1, P4HB | EC:5.3.4.1 | Protein processing in endoplasmic reticulum | map04141 |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.251 |
| SRR1783600 | control | 0.251 |
| SRR1783602 | moderate drought stress | 0.295 |
| SRR1811619 | moderate drought stress | 0.218 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.535 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.110 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.219 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.660 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.092 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 0.213 |
| SRR2868004 | Drought Stress(Tissue:root) | 0.000 |
| SRR2967015 | Control (Tissue:root) | 0.081 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 0.000 |
| SRR9715740 | Leave | 0.000 |
| SRR9715741 | Leave | 0.000 |
| SRR9715739 | Root | 0.049 |
| SRR9715742 | Root | 0.078 |
| SRR9715743 | Root | 0.058 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 0.013 |
| SRR8400027 | Control-Root | 0.017 |