Gene detail information of Glyur000816s00024886.2


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT2G01140.10Aldolase superfamily protein
NRXP_010044133.10PREDICTED: probable fructose-bisphosphate aldolase 3, chloroplastic [Eucalyptus grandis]
COGYP_553978.12.00E-115fructose-bisphosphate aldolase [Burkholderia xenovorans LB400]
Swissprottr|Q9ZU52|ALFC3_ARATH0Probable fructose-bisphosphate aldolase 3, chloroplastic (Precursor)
trEMBLtr|A0A059D603|A0A059D603_EUCGR0Fructose-bisphosphate aldolase {ECO:0000256|RuleBase:RU003994}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold008167957382692+


Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K01623ALDO EC:4.1.2.13 Carbon metabolism map01200
Biosynthesis of amino acidsmap01230
Glycolysis / Gluconeogenesismap00010
Pentose phosphate pathwaymap00030
Fructose and mannose metabolismmap00051
Carbon fixation in photosynthetic organismsmap00710
Methane metabolismmap00680


Gene Ontology

biological_process

GO:0006096  glycolytic process


molecular_function

GO:0003824  catalytic activity

GO:0004332  fructose-bisphosphate aldolase activity


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000816s00024886.2PF00274.14Glycolytic471443.80E-44
Glyur000816s00024886.2PF00274.14Glycolytic2164279.30E-94


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control309.360
SRR1783600control312.345
SRR1783602moderate drought stress238.019
SRR1811619moderate drought stress236.910

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain249.238
DRR006520Root Summer glycyrrhizin high producing strain245.148
DRR006521Root Winter glycyrrhizin high producing strain175.519
DRR006522Root Winter glycyrrhizin high producing strain170.345
DRR006523Root Summer glycyrrhizin low producing strain183.068
DRR006524Root Summer glycyrrhizin low producing strain182.809
DRR006525Leaf Summer glycyrrhizin high producing strain83.675
DRR006526Leaf Summer glycyrrhizin high producing strain83.775

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)376.372
SRR2868004Drought Stress(Tissue:root)311.536
SRR2967015Control (Tissue:root)281.952

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave148.049
SRR9715740Leave110.447
SRR9715741Leave170.554
SRR9715739Root232.282
SRR9715742Root325.579
SRR9715743Root303.351

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h133.861
SRR8749028MeJA induced 9h131.525
SRR8749029MeJA induced 9h102.426
SRR8749030Uninduced209.423
SRR8749031Uninduced117.963
SRR8749032Uninduced148.034

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root300.276
SRR8400027Control-Root273.698

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved