Gene detail information of Glyur000816s00024888.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G15110.10phosphatidyl serine synthase family protein
NRXP_004497015.10PREDICTED: phosphatidylserine synthase 2-like isoform X4 [Cicer arietinum]
Swissprottr|F4HXY7|PSS1_ARATH0CDP-diacylglycerol--serine O-phosphatidyltransferase 1
trEMBLtr|A0A072VRS8|A0A072VRS8_MEDTR0Phosphatidylserine synthase {ECO:0000313|EMBL:KEH44153.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00816109064115018+


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K08730PTDSS2 EC:2.7.8.29 Glycerophospholipid metabolism map00564


Gene Ontology

biological_process

GO:0006659  phosphatidylserine biosynthetic process



Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000816s00024888.1PF03034.10PSS1013832.00E-119


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control1.765
SRR1783600control2.051
SRR1783602moderate drought stress3.694
SRR1811619moderate drought stress3.487

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain4.415
DRR006520Root Summer glycyrrhizin high producing strain3.980
DRR006521Root Winter glycyrrhizin high producing strain9.008
DRR006522Root Winter glycyrrhizin high producing strain8.709
DRR006523Root Summer glycyrrhizin low producing strain5.821
DRR006524Root Summer glycyrrhizin low producing strain5.777
DRR006525Leaf Summer glycyrrhizin high producing strain9.513
DRR006526Leaf Summer glycyrrhizin high producing strain9.434

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)25.524
SRR2868004Drought Stress(Tissue:root)31.006
SRR2967015Control (Tissue:root)39.858

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave11.591
SRR9715740Leave12.890
SRR9715741Leave11.035
SRR9715739Root4.027
SRR9715742Root6.642
SRR9715743Root6.148

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h9.969
SRR8749028MeJA induced 9h11.928
SRR8749029MeJA induced 9h14.866
SRR8749030Uninduced31.810
SRR8749031Uninduced54.927
SRR8749032Uninduced28.266

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root15.064
SRR8400027Control-Root18.495

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved