Gene detail information of Glyur000817s00031373.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT5G58800.21.00E-87Quinone reductase family protein
NRXP_003615608.11.27E-136Flavoprotein wrbA [Medicago truncatula]
COGNP_415524.13.00E-54NAD(P)H:quinone oxidoreductase [Escherichia coli str. K-12 substr. MG1655]
Swissprottr|Q9LUX9|FQRL3_ARATH2.00E-110Probable NAD(P)H dehydrogenase (quinone) FQR1-like 3 {ECO:0000305}
trEMBLtr|G7K6C8|G7K6C8_MEDTR5.00E-137Uncharacterized protein {ECO:0000313|EMBL:AFK39687.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold008175815560527-


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K03809wrbA EC:1.6.5.2 Ubiquinone and other terpenoid-quinone biosynthesis map00130


Gene Ontology

biological_process

GO:0045892  negative regulation of transcription, DNA-templated


molecular_function

GO:0010181  FMN binding

GO:0016491  oxidoreductase activity


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000817s00031373.1PF03358.10FMN_red181463.30E-14


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control6.401
SRR1783600control6.374
SRR1783602moderate drought stress7.623
SRR1811619moderate drought stress7.767

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain11.941
DRR006520Root Summer glycyrrhizin high producing strain11.863
DRR006521Root Winter glycyrrhizin high producing strain24.615
DRR006522Root Winter glycyrrhizin high producing strain24.335
DRR006523Root Summer glycyrrhizin low producing strain11.905
DRR006524Root Summer glycyrrhizin low producing strain11.863
DRR006525Leaf Summer glycyrrhizin high producing strain19.331
DRR006526Leaf Summer glycyrrhizin high producing strain18.891

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)23.886
SRR2868004Drought Stress(Tissue:root)30.080
SRR2967015Control (Tissue:root)31.603

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave29.308
SRR9715740Leave28.899
SRR9715741Leave44.195
SRR9715739Root3.275
SRR9715742Root9.049
SRR9715743Root5.568

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h21.274
SRR8749028MeJA induced 9h11.073
SRR8749029MeJA induced 9h19.156
SRR8749030Uninduced21.344
SRR8749031Uninduced15.484
SRR8749032Uninduced22.203

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root20.528
SRR8400027Control-Root19.463

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved