Gene detail

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Gene detail information of Glyur000817s00031375.1

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT5G58860.1	0	cytochrome P450, family 86, subfamily A, polypeptide 1
NR	XP_003544876.2	0	PREDICTED: cytochrome P450 86A1-like [Glycine max]
COG	YP_008152272.1	2.00E-42	hypothetical protein SCE1572_29415 [Sorangium cellulosum So0157-2]
Swissprot	tr\|P48422\|C86A1_ARATH	0	Cytochrome P450 86A1
trEMBL	tr\|I1MB99\|I1MB99_SOYBN	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GLYMA14G37130.1}

Sequence

Transcript Sequence

>Glyur000817s00031375.1
ATGGAGACCCTCCCTCTCCTCCTAACACTAACAGCNGCCCTATCTGCCTATTTCCTTTGGTTCCATCTCCTCGCCCGAACCCTAACCGGTCCAAAGGCATGGCCCTTTGTGGGTAGCTTCCCGGCCGTGTTCATGAACCGAGACCGGATCCACGATTGGATCGCCGGAAACCTCCGNGCCACGGGCGGTTCAGCCACCTACCAAACATGCATCATCCCAATCCCTTTCTTGGCTNGCAAGCAAGGGTTCTACACCGTCACGTGCCACCCGAAGAATCTCGAGCATATCCTCCGAACCCGGTTCGACAACTACCCAAAGGGACCCAAGTGGCAGATTGCATTCCATGACCTCTTGGGCCAAGGNATATTCAACAGTGACGGGGAGACATGGCTCATGCAACGCAAGACCGCTGCACTTGAATTCACCACGCGAACCTTGAGACATGCCATGGCTCGATGGGTGAACCGGTCCATCAAGAACCGGTTGTGGTGCATTTTGGACAAGGCATCCAAAGACAAAGTCTCGGTAGACTTGCAAGACCTTCTATTGNGATTAACATTTGACAACATTTGTGGACTCACCTTTGGTAAAGACCCAGAAACTCTTTCACCGGACCTACCCGAAAACCCATTTTCCGTTGCTTTTGACACCGCCACAGAAGCCACCATGCACAGGTTCCTCTACCCAGGTCTATTATGGAGGTTCCAGAAACTTCTCTGCATTGGAGCCGAGAAGAGGCTAAAGCAGAGTCTCCAAATCGTAGAAACCTACATGAACGACGCCGTTTCGGATCGCAAGGAAACTCCTTCAGACGACCTACTATCACGTTTCATGAAGAAACGCGACACCGACGGAAAGCCCTTCTCATCCGCGGTGCTGCAACGCATCGTTTTGAACTTCGTCCTCGCCGGAAGGGACACGTCATCGGTGGCACTCAGCTGGTTCTTCTGGCTCGTCATGAACAACCCCAAAGTTGAGGAGAAGATCGTTAACGAGTTAACGGCGGTCCTCGAAGACACTCGCGGCGGAGAACGGAAAAAATGGACGGAGGATCCTCTTGATTTCGAGGAAGCCGATCGGTTGGTTTATCTGAAAGCTGCTTTGGCCGAAACGCTGCGTTTATACCCTTCGGTGCCGCAGGATTTCAAGCAGGCCGTCGCCGACGATGTTTTGCCGGACGGTACGGTGGTTCCGGCGGGTTCGACGGTGACGTATTCGATTTATTCGGCTGGGAGGATGGAGACTTTATGGGGTGAGGATTGCGTTGAGTTTAAACCGGAGAGGTGGCTTTCGGTTCGNGGTGACCGGTTCGAACCGCCCAAGGATGGGTTCATGTTCGTTGCGTTTAACGCTGGACCGAGAACTTGTTTGGGGAAGGACCTGGCTTACCTGCAGATGAAGTCTGTGGCTGCTGCTGTTCTGTTGCGTTACCGGCTATCGCTGGTTCCCGGTCACCAAGTGGAGCAGAAGATGTCTCTCACCTTGTTCATGAAGAATGGNCTCAGGGTGTTCTTGAGTCCACGTAAGCTTTAA

Protein Sequence

Location information(JBrowse)

Scaffold	Start	End	Strand
Scaffold00817	68589	71155	-

Gene family

Gene family	subfamily
Cytochrome P450 Family	CYP86A1

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
K15401	CYP86A1	EC:1.14.-.-	Cutin, suberine and wax biosynthesis	map00073

Gene Ontology

biological_process
GO:0055114 oxidation-reduction process

molecular_function GO:0005506 iron ion binding GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen GO:0020037 heme binding

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000817s00031375.1	PF00067.17	p450	84	497	4.00E-66

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	48.153
SRR1783600	control	48.413
SRR1783602	moderate drought stress	41.923
SRR1811619	moderate drought stress	41.596

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	0.141
DRR006520	Root Summer glycyrrhizin high producing strain	0.140
DRR006521	Root Winter glycyrrhizin high producing strain	0.072
DRR006522	Root Winter glycyrrhizin high producing strain	0.070
DRR006523	Root Summer glycyrrhizin low producing strain	0.071
DRR006524	Root Summer glycyrrhizin low producing strain	0.071
DRR006525	Leaf Summer glycyrrhizin high producing strain	0.181
DRR006526	Leaf Summer glycyrrhizin high producing strain	0.181

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress(Tissue:root)	156.023
SRR2868004	Drought Stress(Tissue:root)	74.269
SRR2967015	Control (Tissue:root)	60.883

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leave	0.217
SRR9715740	Leave	0.634
SRR9715741	Leave	0.809
SRR9715739	Root	134.463
SRR9715742	Root	26.961
SRR9715743	Root	51.143

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	0.000
SRR8749028	MeJA induced 9h	0.044
SRR8749029	MeJA induced 9h	0.039
SRR8749030	Uninduced	0.066
SRR8749031	Uninduced	0.000
SRR8749032	Uninduced	0.154

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment-Root	223.705
SRR8400027	Control-Root	196.529