Gene detail information of Glyur000821s00020778.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G24735.11.00E-50S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
NRXP_004504753.16.20E-86PREDICTED: caffeoyl-CoA O-methyltransferase-like [Cicer arietinum]
COGYP_007072655.12.00E-31caffeoyl-CoA O-methyltransferase [Leptolyngbya sp. PCC 7376]
Swissprottr|C7AE94|FAOMT_VITVI2.00E-69Flavonoid 3',5'-methyltransferase
trEMBLtr|A0A072UQF3|A0A072UQF3_MEDTR8.00E-86Caffeoyl-CoA-O-methyltransferase {ECO:0000313|EMBL:KEH31283.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold008219555865-


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K00588E2.1.1.104 EC:2.1.1.104 Phenylalanine metabolism map00360
Phenylpropanoid biosynthesismap00940
Stilbenoid, diarylheptanoid and gingerol biosynthesismap00945
Flavonoid biosynthesismap00941


Gene Ontology

molecular_function

GO:0008171  O-methyltransferase activity



Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000821s00020778.1PF01596.12Methyltransf_320924.70E-26


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control11.400
SRR1783600control11.401
SRR1783602moderate drought stress6.863
SRR1811619moderate drought stress7.417

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain21.375
DRR006520Root Summer glycyrrhizin high producing strain20.355
DRR006521Root Winter glycyrrhizin high producing strain3.259
DRR006522Root Winter glycyrrhizin high producing strain4.004
DRR006523Root Summer glycyrrhizin low producing strain11.048
DRR006524Root Summer glycyrrhizin low producing strain11.793
DRR006525Leaf Summer glycyrrhizin high producing strain2.761
DRR006526Leaf Summer glycyrrhizin high producing strain3.147

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)92.117
SRR2868004Drought Stress(Tissue:root)96.097
SRR2967015Control (Tissue:root)84.512

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave4.371
SRR9715740Leave3.921
SRR9715741Leave3.451
SRR9715739Root1.027
SRR9715742Root2.774
SRR9715743Root2.578

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h0.311
SRR8749028MeJA induced 9h0.515
SRR8749029MeJA induced 9h0.879
SRR8749030Uninduced0.973
SRR8749031Uninduced1.272
SRR8749032Uninduced0.879

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root24.454
SRR8400027Control-Root26.202

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved