Gene detail information of Glyur000821s00020795.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT3G48750.11.00E-147cell division control 2
NRXP_004504733.10PREDICTED: cell division control protein 2 homolog 2-like isoform X1 [Cicer arietinum]
COGYP_003112167.12.00E-26serine/threonine protein kinase [Catenulispora acidiphila DSM 44928]
Swissprottr|Q41639|CDC2_VIGAC0Cell division control protein 2 homolog
trEMBLtr|I3T768|I3T768_LOTJA0Uncharacterized protein {ECO:0000313|EMBL:AFK48360.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold008219034895914-


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:4.5.2


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K02206CDK2 EC:2.7.11.22 FoxO signaling pathway map04068
PI3K-Akt signaling pathwaymap04151
Cell cyclemap04110
Oocyte meiosismap04114
p53 signaling pathwaymap04115
Progesterone-mediated oocyte maturationmap04914
Pathways in cancermap05200
Viral carcinogenesismap05203
Prostate cancermap05215
Small cell lung cancermap05222
Measlesmap05162
Hepatitis Bmap05161
Herpes simplex infectionmap05168
Epstein-Barr virus infectionmap05169


Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000821s00020795.1PF00069.20Pkinase43071.20E-74


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control29.547
SRR1783600control29.282
SRR1783602moderate drought stress40.586
SRR1811619moderate drought stress39.549

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain49.678
DRR006520Root Summer glycyrrhizin high producing strain50.367
DRR006521Root Winter glycyrrhizin high producing strain61.723
DRR006522Root Winter glycyrrhizin high producing strain59.928
DRR006523Root Summer glycyrrhizin low producing strain46.039
DRR006524Root Summer glycyrrhizin low producing strain45.508
DRR006525Leaf Summer glycyrrhizin high producing strain15.181
DRR006526Leaf Summer glycyrrhizin high producing strain14.959

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)72.404
SRR2868004Drought Stress(Tissue:root)93.642
SRR2967015Control (Tissue:root)92.134

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave30.805
SRR9715740Leave26.416
SRR9715741Leave29.871
SRR9715739Root43.894
SRR9715742Root38.194
SRR9715743Root37.775

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h97.324
SRR8749028MeJA induced 9h58.230
SRR8749029MeJA induced 9h74.477
SRR8749030Uninduced26.356
SRR8749031Uninduced27.012
SRR8749032Uninduced38.602

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root60.322
SRR8400027Control-Root66.601

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved