Gene detail information of Glyur000822s00038923.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G74260.10purine biosynthesis 4
NRXP_004503568.10PREDICTED: probable phosphoribosylformylglycinamidine synthase, chloroplastic/mitochondrial-like [Cicer arietinum]
COGYP_002248472.10phosphoribosylformylglycinamidine synthase [Thermodesulfovibrio yellowstonii DSM 11347]
Swissprottr|Q9M8D3|PUR4_ARATH0Probable phosphoribosylformylglycinamidine synthase, chloroplastic/mitochondrial (Precursor)
trEMBLtr|A0A072TUU6|A0A072TUU6_MEDTR0Phosphoribosylformylglycinamidine synthase {ECO:0000313|EMBL:KEH21294.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold008225671964663-


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K01952purL, PFAS EC:6.3.5.3 Purine metabolism map00230


Gene Ontology

biological_process

GO:0006189  'de novo' IMP biosynthetic process


molecular_function

GO:0003824  catalytic activity

GO:0004642  phosphoribosylformylglycinamidine synthase activity


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000822s00038923.1PF00586.19AIRS3824691.90E-05
Glyur000822s00038923.1PF02769.17AIRS_C5116643.20E-18
Glyur000822s00038923.1PF02769.17AIRS_C91010501.30E-20
Glyur000822s00038923.1PF13507.1GATase_5111813875.20E-104


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control12.159
SRR1783600control12.049
SRR1783602moderate drought stress15.156
SRR1811619moderate drought stress14.990

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain18.968
DRR006520Root Summer glycyrrhizin high producing strain18.597
DRR006521Root Winter glycyrrhizin high producing strain7.196
DRR006522Root Winter glycyrrhizin high producing strain7.059
DRR006523Root Summer glycyrrhizin low producing strain15.693
DRR006524Root Summer glycyrrhizin low producing strain15.726
DRR006525Leaf Summer glycyrrhizin high producing strain10.320
DRR006526Leaf Summer glycyrrhizin high producing strain9.970

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)19.334
SRR2868004Drought Stress(Tissue:root)22.567
SRR2967015Control (Tissue:root)24.706

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave15.604
SRR9715740Leave15.879
SRR9715741Leave15.635
SRR9715739Root13.530
SRR9715742Root33.984
SRR9715743Root30.499

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h9.003
SRR8749028MeJA induced 9h14.780
SRR8749029MeJA induced 9h6.417
SRR8749030Uninduced6.063
SRR8749031Uninduced3.883
SRR8749032Uninduced3.939

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root19.630
SRR8400027Control-Root23.516

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved