Gene detail information of Glyur000823s00027912.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT4G24040.10trehalase 1
NRKEH21287.10trehalase [Medicago truncatula]
COGYP_004052256.11.00E-84alpha,alpha-trehalase [Marivirga tractuosa DSM 4126]
Swissprottr|Q9SU50|TRE1_ARATH0Trehalase
trEMBLtr|A0A072TV17|A0A072TV17_MEDTR0Trehalase {ECO:0000256|RuleBase:RU361180}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold008238780092265-


Gene family

Gene familysubfamily
Carbohydrate-Active enzymes FamilyGH37


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K01194TREH, treA, treF EC:3.2.1.28 Starch and sucrose metabolism map00500


Gene Ontology

biological_process

GO:0005991  trehalose metabolic process


molecular_function

GO:0003824  catalytic activity

GO:0004555  alpha,alpha-trehalase activity


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000823s00027912.1PF01204.13Trehalase695832.90E-175


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control21.665
SRR1783600control21.949
SRR1783602moderate drought stress25.073
SRR1811619moderate drought stress25.073

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain27.381
DRR006520Root Summer glycyrrhizin high producing strain27.405
DRR006521Root Winter glycyrrhizin high producing strain20.256
DRR006522Root Winter glycyrrhizin high producing strain19.815
DRR006523Root Summer glycyrrhizin low producing strain31.338
DRR006524Root Summer glycyrrhizin low producing strain31.914
DRR006525Leaf Summer glycyrrhizin high producing strain7.674
DRR006526Leaf Summer glycyrrhizin high producing strain7.709

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)33.774
SRR2868004Drought Stress(Tissue:root)37.998
SRR2967015Control (Tissue:root)31.193

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave8.830
SRR9715740Leave14.741
SRR9715741Leave21.966
SRR9715739Root4.643
SRR9715742Root13.721
SRR9715743Root10.680

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h17.471
SRR8749028MeJA induced 9h12.024
SRR8749029MeJA induced 9h11.439
SRR8749030Uninduced8.231
SRR8749031Uninduced5.320
SRR8749032Uninduced6.511

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root32.129
SRR8400027Control-Root29.022

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved