Gene detail information of Glyur000825s00032932.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT5G10330.22.00E-166histidinol phosphate aminotransferase 1
NRKHN32788.10Histidinol-phosphate aminotransferase, chloroplastic [Glycine soja]
COGYP_005442148.16.00E-121histidinol-phosphate aminotransferase [Caldilinea aerophila DSM 14535 = NBRC 104270]
Swissprottr|O82030|HIS8_TOBAC0Histidinol-phosphate aminotransferase, chloroplastic (Precursor)
trEMBLtr|I1MNX6|I1MNX6_SOYBN0Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA16G27220.5}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold008258766499421-


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K00817hisC EC:2.6.1.9 Biosynthesis of amino acids map01230
Histidine metabolismmap00340
Tyrosine metabolismmap00350
Phenylalanine metabolismmap00360
Phenylalanine, tyrosine and tryptophan biosynthesismap00400
Tropane, piperidine and pyridine alkaloid biosynthesismap00960
Novobiocin biosynthesismap00401


Gene Ontology

biological_process

GO:0000105  histidine biosynthetic process

GO:0009058  biosynthetic process


molecular_function

GO:0003824  catalytic activity

GO:0004400  histidinol-phosphate transaminase activity

GO:0030170  pyridoxal phosphate binding


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000825s00032932.1PF00155.16Aminotran_1_2954203.50E-49


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control14.165
SRR1783600control14.192
SRR1783602moderate drought stress13.269
SRR1811619moderate drought stress13.174

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain24.735
DRR006520Root Summer glycyrrhizin high producing strain24.457
DRR006521Root Winter glycyrrhizin high producing strain15.895
DRR006522Root Winter glycyrrhizin high producing strain15.168
DRR006523Root Summer glycyrrhizin low producing strain17.217
DRR006524Root Summer glycyrrhizin low producing strain16.957
DRR006525Leaf Summer glycyrrhizin high producing strain18.712
DRR006526Leaf Summer glycyrrhizin high producing strain18.797

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)20.948
SRR2868004Drought Stress(Tissue:root)19.440
SRR2967015Control (Tissue:root)16.705

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave26.741
SRR9715740Leave33.171
SRR9715741Leave29.554
SRR9715739Root9.207
SRR9715742Root16.916
SRR9715743Root15.296

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h17.095
SRR8749028MeJA induced 9h18.745
SRR8749029MeJA induced 9h12.957
SRR8749030Uninduced7.245
SRR8749031Uninduced2.281
SRR8749032Uninduced4.402

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root28.519
SRR8400027Control-Root25.424

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved