Gene detail information of Glyur000832s00032806.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G05260.1 | 2.00E-39 | cytochrome p450 79a2 |
| NR | XP_010059539.1 | 6.78E-72 | PREDICTED: tryptophan N-monooxygenase 1-like [Eucalyptus grandis] |
| Swissprot | tr|Q9M7B8|C79D1_MANES | 2.00E-44 | Valine N-monooxygenase 1 |
| trEMBL | tr|B8A7X1|B8A7X1_ORYSI | 2.00E-68 | Putative uncharacterized protein {ECO:0000313|EMBL:EEC70622.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00832 | 9862 | 19127 | + |
Gene family
| Gene family | subfamily |
|---|---|
| Cytochrome P450 Family | CYP79A2 |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000832s00032806.1 | PF00067.17 | p450 | 155 | 193 | 3.00E-06 |
| Glyur000832s00032806.1 | PF00067.17 | p450 | 213 | 288 | 8.50E-14 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.000 |
| SRR1783600 | control | 0.000 |
| SRR1783602 | moderate drought stress | 0.000 |
| SRR1811619 | moderate drought stress | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 4.069 |
| SRR2868004 | Drought Stress(Tissue:root) | 7.010 |
| SRR2967015 | Control (Tissue:root) | 4.758 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 0.000 |
| SRR9715740 | Leave | 0.000 |
| SRR9715741 | Leave | 0.000 |
| SRR9715739 | Root | 0.000 |
| SRR9715742 | Root | 0.000 |
| SRR9715743 | Root | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 3.289 |
| SRR8749028 | MeJA induced 9h | 3.811 |
| SRR8749029 | MeJA induced 9h | 2.293 |
| SRR8749030 | Uninduced | 3.738 |
| SRR8749031 | Uninduced | 1.947 |
| SRR8749032 | Uninduced | 1.777 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 0.000 |
| SRR8400027 | Control-Root | 0.000 |