Gene detail

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Gene detail information of Glyur000832s00032810.1

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT1G25570.1	0	Di-glucose binding protein with Leucine-rich repeat domain
NR	XP_004496200.1	0	PREDICTED: receptor-like protein kinase At3g21340-like [Cicer arietinum]
COG	YP_007319008.1	2.00E-07	hypothetical protein FAES_0403 [Fibrella aestuarina BUZ 2]
Swissprot	tr\|Q9ZQQ7\|Y2144_ARATH	4.00E-40	Putative leucine-rich repeat receptor-like serine/threonine-protein kinase At2g14440 (Precursor)
trEMBL	tr\|A0A072VPY1\|A0A072VPY1_MEDTR	0	Carbohydrate-binding protein of the ER protein {ECO:0000313\|EMBL:KEH43453.1}

Sequence

Transcript Sequence

>Glyur000832s00032810.1
ATGCAGTCACAGCTAGAAGAGAACAGTGAAATGAACATTAGTGAAGGCCTTGTTAAAAATCGTAGATTAACTAATTGTGCAGAATTTACAACAGGTTTACGAGGTACTACTGATGATCTTCTCTCCTACCACATCAACTGCGGCAGTTCCACAAACACCACCGACGCCTACAACACCACCTGGCTCTCCGACCGCTTCTTCACCGGCGGCTCCACCGCCCTCGTCTCCGAGCCCCTCCGCTTCCCCCTCCCCTCCGAGAAGACCCTCCGCTTCTTCCCCGCCTCCTCCTACGGCAAGAAGAACTGCTACTCCTTCCCCTCCCTCCCTTCCGCCCGCTACTTCCTCCGCACCTTCACCGTCTACGACAACTACGACGCCAAGTCCCGACCTCCCTCCTTCGACGTCGCCCTCGCCGCCACCGTCCTCTTCAGCTGGCGCTCCCCATGGCCCGAACCCACCGCCCGCGACGGCGCCTACTCCGACCTTTTCGCCTTCCTAAACGCCTCCACCGCCGCCACCGCTGATCTCTGTTTCTACGGCTTCGCCACCGACGCTCCCGTCGTCTCCTCCGTCGAGCTCGTCCCGGTCGATTCCGCCTCCTACGATTCCCCCTCCACCGGACGAAACCTTGTCCTCGTCAACTACGGCAGGTTTTCATGCGGCTCCGGCGACCACTGGGGTCCCGGCTTCACCGGCGATACCGACCGGTTCGGCCGGTCCTGGCAACCAGACTCCACGTTCCGAACAGGACCGGAAGGTTCCGTACGAGTGGTGTCGACGGAGAACAGCGTGGGCGGCNCCGACAGGGAACCGAACTATTTCCCGATGAAGCTGTACCAGAGGGCGGTGACGGCGGAGGAGGCACTCGAGTACGAATTGGGTGTGGACGCGAAGATGGACTATATGGTGTGGCTTCACTTTGCGGAGATTGATTCGAGCGTGAAGAGAGCTGGGGAGAGGGTGTTCGACGTCTTCATCAACGGCAACAACGTGACACGTGTCGATATATACAAGGAGGTGGGAGGTTTCGCTGCGTTCACTTGGCATTACACCGTTAGGAACTTGAGCAGTAACGTATTGGGTATCAAGCTCGTCGCTGTTTCTGGTGCCCCTCTCATTAGTGGCATTGAGAACTATGCATTGGTCCCCAATGATCCTTCCACTCACCCTCTCCAAGTGAGTGCCATGAAGGCATTGAAGGACTCGCTGCGTGTTCCGGATAGAATGGGTTGGAATGGTGATCCTTGTGCTCCTACATCTTGGGATGCTTGGGAAGGTGTTACCTGCCGAATGAGTGANGATAAAACTGCTCTCCTTATAACTGAAATAAATCTTGGCAGTCAAGGCTTGAAAGGGTACATAAGTGACCATATTAGNCTCTTGTCAGACTTAGTAAGCCTGAACTTGAGTTCTAATTCCTTGGGAGGCGAAATACCTTCGGGACTGGGTCAAAAATCCCTGATACAAGTGGATTTATCCAACAATCAGTTAACGGGCTCCATACCTGATAGTTTGGCGTCTTCCAATTTGCAGCTTGTGCTATTGAATGGTAACTTATTGGAAGGACGAGTGCCAGAGCATCTTTATTCGGTTGGCGTGCATGGTGGAGCTATTGAGTATGTCACTCTAATCTGCTGCATAATGCTGTGTTCAATTGAAATTCTCTCTGGCAACAAGGGTTTGTGCGGTGTACCATCTCTACCATCATGTCCTATGTTTTGGGAGCATGGCAGATTATCGAGTCGGGGTAAAATTGCAATAAGCTTGTCATGTCTTTTTGTTTTCTGTGTGGTACTGCTGCTGGTATATATCTACATCAGAAGGAAAAGGAATGATTATGACTTTGGTCTGCCTCATGAATTAATGGCACTAGCCGCCAAGAGAAACCGATATCAGAGGCAGAAATCGTTGATGCTTCTTGAGCTGGAAAGTCANCATGCCAAGGGATTACCTTCACCTTTTACTCCACAGTAACTTATTTTGAGGGAAATAGAAGATTGATTCCATAGCTTTCGGCTAAATAGTAAATATACACCGTTACCGCATAAAGAAAGTAATTCAATATTTACAAGCTTGCAGCATCCCTGCTCAGCCTTGACACAATGCTGCTTTAGAAAGGGAAAAGAAAAGACTCCTGGGGTTTTGCTTTTCTCCTTCAACTTCTTGTCACGTCGAAGATTCTGCAAGCTAATGTATTAATCACTTTATCAGGGACTTAATTTGACAATCGCTTCCTGAACCAGAATCATCGTACGAGAGGCATACCCCGGTTATATCACTAACCTTCTGTACCTTTTGATGAATTCCTCATAGGAACAACCCATCAAATCATCAATGTAATATACCATTTCATTCGCAAGTCAGGTTCCGGTAGTTTTTCATGTCACATCAATTCTGCTTGATTCTTAACACTGCTGATTTATGTAGTCAAAAACAATGAGTGAGTGAGTGAGTGAGCTTTATTGTATCATGTATTGTCTAAGCTTTTCCATAC

Protein Sequence

Location information(JBrowse)

Scaffold	Start	End	Strand
Scaffold00832	73513	80365	-

Gene family

Gene family	subfamily
Carbohydrate-Active enzymes Family	CBM57

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

Not hits found.

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000832s00032810.1	PF12819.2	Malectin_like	45	380	1.00E-55

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	10.079
SRR1783600	control	9.773
SRR1783602	moderate drought stress	7.248
SRR1811619	moderate drought stress	6.858

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	3.681
DRR006520	Root Summer glycyrrhizin high producing strain	3.671
DRR006521	Root Winter glycyrrhizin high producing strain	0.937
DRR006522	Root Winter glycyrrhizin high producing strain	0.991
DRR006523	Root Summer glycyrrhizin low producing strain	1.968
DRR006524	Root Summer glycyrrhizin low producing strain	1.994
DRR006525	Leaf Summer glycyrrhizin high producing strain	1.809
DRR006526	Leaf Summer glycyrrhizin high producing strain	1.577

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress(Tissue:root)	11.479
SRR2868004	Drought Stress(Tissue:root)	9.292
SRR2967015	Control (Tissue:root)	9.371

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leave	0.886
SRR9715740	Leave	0.486
SRR9715741	Leave	1.021
SRR9715739	Root	5.424
SRR9715742	Root	6.410
SRR9715743	Root	7.969

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	10.049
SRR8749028	MeJA induced 9h	12.397
SRR8749029	MeJA induced 9h	6.486
SRR8749030	Uninduced	6.213
SRR8749031	Uninduced	2.871
SRR8749032	Uninduced	3.588

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment-Root	26.388
SRR8400027	Control-Root	24.472