Gene detail information of Glyur000834s00025300.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT3G56760.10Protein kinase superfamily protein
NRXP_007145486.10hypothetical protein PHAVU_007G243100g [Phaseolus vulgaris]
COGYP_001415903.19.00E-29protein kinase [Xanthobacter autotrophicus Py2]
Swissprottr|O80673|CAMK1_ARATH0CDPK-related kinase 1
trEMBLtr|V7BKA5|V7BKA5_PHAVU0Uncharacterized protein {ECO:0000313|EMBL:ESW17480.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold008341782224067+


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:4.2.1


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000834s00025300.1PF00069.20Pkinase1323945.80E-67


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control16.691
SRR1783600control16.823
SRR1783602moderate drought stress20.033
SRR1811619moderate drought stress19.965

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain18.866
DRR006520Root Summer glycyrrhizin high producing strain18.769
DRR006521Root Winter glycyrrhizin high producing strain10.213
DRR006522Root Winter glycyrrhizin high producing strain10.167
DRR006523Root Summer glycyrrhizin low producing strain19.356
DRR006524Root Summer glycyrrhizin low producing strain19.336
DRR006525Leaf Summer glycyrrhizin high producing strain5.261
DRR006526Leaf Summer glycyrrhizin high producing strain5.208

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)29.461
SRR2868004Drought Stress(Tissue:root)26.464
SRR2967015Control (Tissue:root)27.103

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave9.988
SRR9715740Leave7.777
SRR9715741Leave9.520
SRR9715739Root6.455
SRR9715742Root16.113
SRR9715743Root15.301

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h9.435
SRR8749028MeJA induced 9h8.989
SRR8749029MeJA induced 9h7.516
SRR8749030Uninduced10.354
SRR8749031Uninduced10.726
SRR8749032Uninduced7.431

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root24.717
SRR8400027Control-Root26.764

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved