Gene detail

Database	Orthologs	E value	Annotation
TAIR	AT3G52270.1	3.00E-80	Transcription initiation factor IIF, beta subunit
NR	XP_003524637.2	2.45E-173	PREDICTED: general transcription factor IIF subunit 2-like [Glycine max]
trEMBL	tr\|K7KP46\|K7KP46_SOYBN	2.00E-173	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GLYMA05G17240.1}

Transcript Sequence

Protein Sequence

Scaffold	Start	End	Strand
Scaffold00836	73460	77922	+

Gene family	subfamily
--	--

KO	Enzyme	Enzyme ID	pathway	mapID
K03139	TFIIF2, GTF2F2, TFG2	EC:3.6.4.12	Basal transcription factors	map03022

biological_process

GO:0006366 transcription from RNA polymerase II promoter

GO:0006367 transcription initiation from RNA polymerase II promoter

cellular_component GO:0005674 transcription factor TFIIF complex molecular_function GO:0003824 catalytic activity "

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000836s00028093.1	PF02270.10	TFIIF_beta	19	108	4.60E-09
Glyur000836s00028093.1	PF02270.10	TFIIF_beta	104	257	1.60E-38

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	0.000
DRR006520	Root Summer glycyrrhizin high producing strain	0.000
DRR006521	Root Winter glycyrrhizin high producing strain	0.000
DRR006522	Root Winter glycyrrhizin high producing strain	0.000
DRR006523	Root Summer glycyrrhizin low producing strain	0.293
DRR006524	Root Summer glycyrrhizin low producing strain	0.190
DRR006525	Leaf Summer glycyrrhizin high producing strain	1.461
DRR006526	Leaf Summer glycyrrhizin high producing strain	1.289

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment-Root	0.313
SRR8400027	Control-Root	0.507