Gene detail information of Glyur000836s00028095.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G52250.1 | 1.00E-134 | Duplicated homeodomain-like superfamily protein |
| NR | XP_004489929.1 | 0 | PREDICTED: uncharacterized protein LOC101505283 isoform X1 [Cicer arietinum] |
| trEMBL | tr|K7N457|K7N457_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA20G31871.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00836 | 94478 | 105504 | - |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | MYB-related |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000836s00028095.1 | PF00249.26 | Myb_DNA-binding | 829 | 870 | 1.10E-06 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 18.908 |
| SRR1783600 | control | 18.932 |
| SRR1783602 | moderate drought stress | 44.475 |
| SRR1811619 | moderate drought stress | 44.287 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 26.356 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 26.064 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 28.278 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 27.686 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 40.901 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 40.656 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 11.785 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 11.633 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 28.917 |
| SRR2868004 | Drought Stress(Tissue:root) | 34.668 |
| SRR2967015 | Control (Tissue:root) | 41.847 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 16.340 |
| SRR9715740 | Leave | 20.106 |
| SRR9715741 | Leave | 20.678 |
| SRR9715739 | Root | 4.610 |
| SRR9715742 | Root | 32.993 |
| SRR9715743 | Root | 27.374 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 13.758 |
| SRR8749028 | MeJA induced 9h | 28.037 |
| SRR8749029 | MeJA induced 9h | 11.205 |
| SRR8749030 | Uninduced | 16.935 |
| SRR8749031 | Uninduced | 10.570 |
| SRR8749032 | Uninduced | 14.689 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 30.108 |
| SRR8400027 | Control-Root | 29.572 |