Gene detail information of Glyur000837s00027489.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT4G24010.13.00E-110cellulose synthase like G1
NRKEH42689.10cellulose synthase-like protein D3 [Medicago truncatula]
COGNP_487797.16.00E-15cellulose synthase catalytic subunit [Nostoc sp. PCC 7120]
Swissprottr|Q570S7|CSLG1_ARATH2.00E-126Cellulose synthase-like protein G1
trEMBLtr|A0A072VKZ3|A0A072VKZ3_MEDTR0Cellulose synthase-like protein D3 {ECO:0000313|EMBL:KEH42689.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold008371582219719-


Gene family

Gene familysubfamily
Carbohydrate-Active enzymes FamilyGT2


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
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Gene Ontology

biological_process

GO:0030244  cellulose biosynthetic process


cellular_component

GO:0016020  membrane


molecular_function

GO:0016760  cellulose synthase (UDP-forming) activity

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Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000837s00027489.1PF03552.9Cellulose_synt1032221.20E-29
Glyur000837s00027489.1PF03552.9Cellulose_synt2353661.40E-35
Glyur000837s00027489.1PF03552.9Cellulose_synt3704891.00E-23
Glyur000837s00027489.1PF03552.9Cellulose_synt5086713.10E-16


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control1.144
SRR1783600control0.979
SRR1783602moderate drought stress1.367
SRR1811619moderate drought stress1.210

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain0.426
DRR006520Root Summer glycyrrhizin high producing strain0.420
DRR006521Root Winter glycyrrhizin high producing strain0.277
DRR006522Root Winter glycyrrhizin high producing strain0.209
DRR006523Root Summer glycyrrhizin low producing strain0.092
DRR006524Root Summer glycyrrhizin low producing strain0.136
DRR006525Leaf Summer glycyrrhizin high producing strain17.068
DRR006526Leaf Summer glycyrrhizin high producing strain16.298

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)2.824
SRR2868004Drought Stress(Tissue:root)0.734
SRR2967015Control (Tissue:root)0.108

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave32.666
SRR9715740Leave17.282
SRR9715741Leave58.418
SRR9715739Root0.337
SRR9715742Root2.385
SRR9715743Root1.942

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h1.229
SRR8749028MeJA induced 9h1.786
SRR8749029MeJA induced 9h1.858
SRR8749030Uninduced21.829
SRR8749031Uninduced46.445
SRR8749032Uninduced26.356

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root2.545
SRR8400027Control-Root3.465

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved