Gene detail information of Glyur000837s00027495.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT3G23150.10Signal transduction histidine kinase, hybrid-type, ethylene sensor
NRXP_004495309.10PREDICTED: ethylene receptor 2-like [Cicer arietinum]
COGYP_001520229.14.00E-42two-component hybrid sensor and regulator histidine kinase [Acaryochloris marina MBIC11017]
Swissprottr|Q0WPQ2|ETR2_ARATH0Ethylene receptor 2
trEMBLtr|A0A072VX71|A0A072VX71_MEDTR0Ethylene receptor ETR2 {ECO:0000313|EMBL:KEH42695.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold008376370868101+


Gene family

Gene familysubfamily
Transcription Factors FamilyOrphans


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K14509ETR, ERS EC:2.7.13.- MAPK signaling pathway - plant map04016
Plant hormone signal transductionmap04075


Gene Ontology

biological_process

GO:0000160  phosphorelay signal transduction system

GO:0007165  signal transduction

GO:0009873  ethylene-activated signaling pathway


cellular_component

GO:0005789  endoplasmic reticulum membrane

GO:0016020  membrane


molecular_function

GO:0000155  phosphorelay sensor kinase activity

GO:0004673  protein histidine kinase activity

GO:0004871  signal transducer activity

GO:0005515  protein binding

"

Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000837s00027495.1PF01590.21GAF1843301.20E-08
Glyur000837s00027495.1PF00512.20HisKA3674302.30E-07
Glyur000837s00027495.1PF00072.19Response_reg6387421.70E-17


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control12.836
SRR1783600control12.869
SRR1783602moderate drought stress7.854
SRR1811619moderate drought stress7.972

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain10.639
DRR006520Root Summer glycyrrhizin high producing strain10.571
DRR006521Root Winter glycyrrhizin high producing strain96.521
DRR006522Root Winter glycyrrhizin high producing strain93.945
DRR006523Root Summer glycyrrhizin low producing strain27.711
DRR006524Root Summer glycyrrhizin low producing strain27.755
DRR006525Leaf Summer glycyrrhizin high producing strain2.809
DRR006526Leaf Summer glycyrrhizin high producing strain2.746

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)26.768
SRR2868004Drought Stress(Tissue:root)32.963
SRR2967015Control (Tissue:root)21.850

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave3.129
SRR9715740Leave3.756
SRR9715741Leave3.696
SRR9715739Root8.829
SRR9715742Root27.001
SRR9715743Root22.973

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h71.244
SRR8749028MeJA induced 9h116.895
SRR8749029MeJA induced 9h69.631
SRR8749030Uninduced54.005
SRR8749031Uninduced78.459
SRR8749032Uninduced67.835

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root39.017
SRR8400027Control-Root45.581

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved