Gene detail information of Glyur000838s00028061.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G04930.1 | 2.00E-04 | DNA-binding storekeeper protein-related transcriptional regulator |
| NR | XP_006482084.1 | 1.50E-47 | PREDICTED: uncharacterized protein LOC102616693 isoform X1 [Citrus sinensis] |
| trEMBL | tr|A0A067EI76|A0A067EI76_CITSI | 7.00E-48 | Uncharacterized protein {ECO:0000313|EMBL:KDO53590.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00838 | 87103 | 94961 | - |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | GeBP |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene OntologyNot hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000838s00028061.1 | PF04504.9 | DUF573 | 42 | 128 | 3.10E-13 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 7.106 |
| SRR1783600 | control | 7.132 |
| SRR1783602 | moderate drought stress | 8.208 |
| SRR1811619 | moderate drought stress | 8.175 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 4.729 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 4.666 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 2.150 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 2.105 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 5.907 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 5.969 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 3.478 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 3.766 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 4.449 |
| SRR2868004 | Drought Stress(Tissue:root) | 6.092 |
| SRR2967015 | Control (Tissue:root) | 4.423 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 2.896 |
| SRR9715740 | Leave | 3.956 |
| SRR9715741 | Leave | 3.192 |
| SRR9715739 | Root | 5.385 |
| SRR9715742 | Root | 3.097 |
| SRR9715743 | Root | 3.708 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 5.330 |
| SRR8749028 | MeJA induced 9h | 5.240 |
| SRR8749029 | MeJA induced 9h | 3.342 |
| SRR8749030 | Uninduced | 2.321 |
| SRR8749031 | Uninduced | 1.764 |
| SRR8749032 | Uninduced | 2.071 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 5.244 |
| SRR8400027 | Control-Root | 4.768 |