Gene detail information of Glyur000844s00023261.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT2G27300.15.00E-49NTM1-like 8
NRXP_004487726.12.10E-159PREDICTED: NAC domain-containing protein 89-like [Cicer arietinum]
Swissprottr|Q9XIN7|NTL8_ARATH4.00E-58Protein NTM1-like 8 {ECO:0000303|PubMed:19704545}
trEMBLtr|K7M2Z6|K7M2Z6_SOYBN1.00E-156Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA13G39090.2}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold008447283237-


Gene family

Gene familysubfamily
Transcription Factors FamilyNAC


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0006355  regulation of transcription, DNA-templated


molecular_function

GO:0003677  DNA binding


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000844s00023261.1PF02365.10NAM17513.10E-07
Glyur000844s00023261.1PF02365.10NAM51948.10E-12


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control1.242
SRR1783600control1.247
SRR1783602moderate drought stress2.129
SRR1811619moderate drought stress2.034

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain3.637
DRR006520Root Summer glycyrrhizin high producing strain3.462
DRR006521Root Winter glycyrrhizin high producing strain41.719
DRR006522Root Winter glycyrrhizin high producing strain41.450
DRR006523Root Summer glycyrrhizin low producing strain4.446
DRR006524Root Summer glycyrrhizin low producing strain4.768
DRR006525Leaf Summer glycyrrhizin high producing strain3.224
DRR006526Leaf Summer glycyrrhizin high producing strain2.810

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)1.192
SRR2868004Drought Stress(Tissue:root)1.656
SRR2967015Control (Tissue:root)1.942

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave2.418
SRR9715740Leave1.962
SRR9715741Leave1.824
SRR9715739Root0.276
SRR9715742Root1.171
SRR9715743Root0.515

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h1.977
SRR8749028MeJA induced 9h1.477
SRR8749029MeJA induced 9h1.859
SRR8749030Uninduced0.678
SRR8749031Uninduced0.298
SRR8749032Uninduced1.200

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root1.422
SRR8400027Control-Root1.473

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved