Gene detail information of Glyur000846s00019243.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G12750.1 | 0 | Homeodomain-like transcriptional regulator |
| NR | KHM99854.1 | 0 | hypothetical protein glysoja_017552 [Glycine soja] |
| trEMBL | tr|K7KRT9|K7KRT9_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA05G36410.2} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00846 | 6075 | 14779 | - |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | DDT |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene OntologyNot hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000846s00019243.1 | PF02791.12 | DDT | 304 | 361 | 7.90E-18 |
| Glyur000846s00019243.1 | PF15612.1 | WHIM1 | 587 | 624 | 0.00061 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 4.204 |
| SRR1783600 | control | 4.154 |
| SRR1783602 | moderate drought stress | 5.729 |
| SRR1811619 | moderate drought stress | 5.578 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 6.247 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 5.823 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 8.259 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 7.796 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 6.392 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 6.448 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 10.179 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 9.823 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 6.505 |
| SRR2868004 | Drought Stress(Tissue:root) | 4.784 |
| SRR2967015 | Control (Tissue:root) | 5.818 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 3.199 |
| SRR9715740 | Leave | 8.031 |
| SRR9715741 | Leave | 3.719 |
| SRR9715739 | Root | 0.778 |
| SRR9715742 | Root | 5.705 |
| SRR9715743 | Root | 4.940 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 8.972 |
| SRR8749028 | MeJA induced 9h | 5.983 |
| SRR8749029 | MeJA induced 9h | 3.870 |
| SRR8749030 | Uninduced | 0.904 |
| SRR8749031 | Uninduced | 0.323 |
| SRR8749032 | Uninduced | 0.389 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 8.638 |
| SRR8400027 | Control-Root | 7.381 |