Gene detail

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Gene detail information of Glyur000846s00019254.1

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT2G24370.1	0	Protein kinase protein with adenine nucleotide alpha hydrolases-like domain
NR	XP_007160217.1	0	hypothetical protein PHAVU_002G302700g [Phaseolus vulgaris]
COG	YP_004463009.1	7.00E-16	serine/threonine protein kinase with PASTA sensor(s) [Mahella australiensis 50-1 BON]
Swissprot	tr\|Q9SW11\|PUB35_ARATH	9.00E-113	Serine/threonine-protein kinase
trEMBL	tr\|I1K653\|I1K653_SOYBN	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GLYMA05G36460.1}

Sequence

Transcript Sequence

>Glyur000846s00019254.1
ATGTCAAGGTCTATTCCAGAGAAGAAGCTAGTGGGAAACCATGTATCGGTTGATGTCAATGATGATGTGGCTAGAGCATACATGCAACAAATGGACAACGAATCCAAAGAGCTTTTCTCTTCATTTCGTGTCTTCTGCAATCGAAAGAGTATACAATGCAAAGAAATCTTGTTGGATGATATGGATATATCCAAGGCAATCATAGAAGGTATTTCTTCGTATTCCATTGAACTTCTGGTACTTGGGGCACCATCAAGGAGTGGCATTGTGAGAAGATTTAGGACAACAGATGTTCCAAGCCTTGTGTCTAAAGGGGCACCCCCATTCTGCACTGTGTACATCATTTCCAAAGGGAAAATCTCATCTGTGAAAACTGCTTCTGCTCCCCTAACTGCTAAACCCACACCTCGTAACAATGCATTGTTGCAGCCACAGCNTGTACAACAAAGTCTTGAGAGAATGGATGCACAACTAACACGCAACCATGTTCCACCAAGATCCTCAACAGAGAAACCGGCACATGTTACACGCCAGCTACCAGATGAAGAGGATTTCAAATCACCATTCACAAGACCTGGAAGACCAATCCACAGATCATTTGAGTCCTCAATCCCTGACTCTGATATTTCATTTGTGAGCAGTGGAAGGCCAAGTGTTGATAGGATGTTCCCTTCATTGTATGAAGAAATGGACTCCGGAATATCCTCTCGCCTTTCATCGAGCTCAGATTATGATCTCAAAAGCTTTGGTTCATCTTACTCAAATGCTAAGTCAGTTGATCACGCTGACTACTCGTTCAGTTCGCAAGACAGTGGACACTCCATGTCATCATCATCAAGGATATCAAATTCGGATGAAGTGGAAGCTGAAATGAGGAGATTGAGGTTAGAACTGAAGCAAACAATGGAAATGTACAGTTCAGCTTGCAAGGAAGCTCTGACAGCAAAGCAAAAGGCACTGGAACTTCAGCGTTGGAAACAGGAAGAACAAAGGAAATCGGAAGATGCGCGAATGGCCGAAGAATCAGCAATGGAAACAGCCGAGAAAGAGAGAGCAAAGTGCAAAATTGCCATGGACGCAGCGGAAGCATCTCGAAAGTATGCAGAATTGGAAGCACAGAAGAGAATGAGTGCAGAAATGAAATCCCAAACAGAACCTGAGCAACAAAAGAAGAAGATGGGTGATGGCTTTTTGCACGGCCCTGCAAGGTACAGAAGATATTCCATTGAGGAAATAGAAGAAGCAACAAATTTATTTTCCCACTCTCTGAAGATCGGAGAAGGAGGTTACGGGCCGGTCTACAGGGCTGAACTAGATCANACACCAGTTGCAATAAAAGTGTTGAAACCAGATGCAGCTCAAGGAAGGGCACAGTTTCAGCAAGAGTACATGTCCAGTGGAAGCTTGGATGATTGTCTCTTCCGGAGAAACAGTAAGTTAGAAGCTCTTCCCTGGCAGCTAAGGTTCAGAATNGCTGCAGAGATTGCCACTGGCCTCCTTTTCCTTCACCAGACAAAACCAGAACCATTGGTGCACCGTGACTTGAAACCCGGGAACATATTGCTTGACCGTAACTTTGTGAGCAAGATCAGTGATGTGGGGTTGGCAAGGCTTGTCCCTCCTTNAGTTGCAGACACCGTGACACAGTACCGCATGACATCAACAGCTGGAACTTTCTGTTACATTGACCCGGAGTACCAGCAAACCGGGATGCTTGGGGTCAAGTCTGATATATACTCATTTGGGATCATGCTGCTACAGATAATAACAGCGAAGCCCCCAATGGGTTTGACTCACCATGTTGCAAGAGCTATTGAGAAGGGTACTTTNGGTGAGATGCTTGACCCAGCTGTTGAGGACTGGCCAATAGAACATGCCTTGCATTTTGCCAAGCTTGGCCTGCAGTGTGCTGAGATGAGAAGGAAAGATAGGCCTGATCTTGGGAAAGTTGTGTTGCCTGAGCTCAACAAGCTCAGAGATTTTGCTGAAGAGAACATGCCCATGATGATGATGATGTTTGGTGCCAGTGCAGGGTTCAAACCAAGAAACAACAACAACAACAACTCTTACTCACCCTCCAGATTTTCCTCATCAGTTGAAGATTCTATGAGTGAGTCCCAGTCGCTGTCTGGATTGTCAGGATATGAAAGCCGTTCAAGCACATCCTCAACGGGAAAAATGTAA

Protein Sequence

Location information(JBrowse)

Scaffold	Start	End	Strand
Scaffold00846	77542	81602	-

Gene family

Gene family	subfamily
Protein Kinases Family	PPC:1.14.2

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process
GO:0006468 protein phosphorylation

molecular_function GO:0004672 protein kinase activity GO:0005524 ATP binding GO:0016772 transferase activity, transferring phosphorus-containing groups

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000846s00019254.1	PF00069.20	Pkinase	459	645	4.00E-24

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	0.140
SRR1783600	control	0.142
SRR1783602	moderate drought stress	0.129
SRR1811619	moderate drought stress	0.115

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	0.465
DRR006520	Root Summer glycyrrhizin high producing strain	0.473
DRR006521	Root Winter glycyrrhizin high producing strain	0.486
DRR006522	Root Winter glycyrrhizin high producing strain	0.434
DRR006523	Root Summer glycyrrhizin low producing strain	0.151
DRR006524	Root Summer glycyrrhizin low producing strain	0.138
DRR006525	Leaf Summer glycyrrhizin high producing strain	0.130
DRR006526	Leaf Summer glycyrrhizin high producing strain	0.207

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress(Tissue:root)	0.053
SRR2868004	Drought Stress(Tissue:root)	0.057
SRR2967015	Control (Tissue:root)	0.252

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leave	0.091
SRR9715740	Leave	0.023
SRR9715741	Leave	0.061
SRR9715739	Root	0.000
SRR9715742	Root	0.095
SRR9715743	Root	0.056

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	0.219
SRR8749028	MeJA induced 9h	0.108
SRR8749029	MeJA induced 9h	0.042
SRR8749030	Uninduced	0.111
SRR8749031	Uninduced	0.159
SRR8749032	Uninduced	0.066

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment-Root	0.128
SRR8400027	Control-Root	0.132