Gene detail information of Glyur000846s00019256.2


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT5G35400.13.00E-118Pseudouridine synthase family protein
NRKHN16701.10tRNA pseudouridine synthase A [Glycine soja]
COGYP_006705776.12.00E-14tRNA pseudouridine synthase A [Cardinium endosymbiont cEper1 of Encarsia pergandiella]
Swissprottr|C0LGU0|RLK_ARATH0Probable LRR receptor-like serine/threonine-protein kinase RLK (Precursor)
trEMBLtr|I1KPQ1|I1KPQ1_SOYBN0tRNA pseudouridine synthase {ECO:0000256|RuleBase:RU003792}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold008468464894579-


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:1.13.4


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
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Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005515  protein binding

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000846s00019256.2PF08263.7LRRNT_229691.20E-07
Glyur000846s00019256.2PF13855.1LRR_81211812.40E-09
Glyur000846s00019256.2PF00069.20Pkinase3386041.50E-30


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control6.491
SRR1783600control7.305
SRR1783602moderate drought stress8.916
SRR1811619moderate drought stress8.863

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain8.696
DRR006520Root Summer glycyrrhizin high producing strain8.626
DRR006521Root Winter glycyrrhizin high producing strain4.481
DRR006522Root Winter glycyrrhizin high producing strain4.264
DRR006523Root Summer glycyrrhizin low producing strain24.882
DRR006524Root Summer glycyrrhizin low producing strain25.046
DRR006525Leaf Summer glycyrrhizin high producing strain4.060
DRR006526Leaf Summer glycyrrhizin high producing strain4.027

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)10.391
SRR2868004Drought Stress(Tissue:root)10.633
SRR2967015Control (Tissue:root)11.689

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave3.470
SRR9715740Leave4.145
SRR9715741Leave4.279
SRR9715739Root1.606
SRR9715742Root4.998
SRR9715743Root5.085

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h9.529
SRR8749028MeJA induced 9h8.214
SRR8749029MeJA induced 9h6.631
SRR8749030Uninduced3.803
SRR8749031Uninduced1.850
SRR8749032Uninduced2.460

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root8.521
SRR8400027Control-Root9.379