Gene detail information of Glyur000847s00024874.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G12990.10beta-1,4-N-acetylglucosaminyltransferase family protein
NRXP_003552002.10PREDICTED: beta-1,4-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase-like [Glycine max]
COGYP_004985011.15.00E-12glycosyl transferase group 1 (modular protein), partial [Azospirillum brasilense Sp245]
trEMBLtr|I1MYN2|I1MYN2_SOYBN0Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA18G01740.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold0084785658100375-


Gene family

Gene familysubfamily
Carbohydrate-Active enzymes FamilyGT17


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K00737MGAT3 EC:2.4.1.144 N-Glycan biosynthesis map00510


Gene Ontology

biological_process

GO:0006487  protein N-linked glycosylation


cellular_component

GO:0016020  membrane


molecular_function

GO:0003830  beta-1,4-mannosylglycoprotein 4-beta-N-acetylglucosaminyltransferase activity

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Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000847s00024874.1PF04724.8Glyco_transf_17343901.10E-177


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control5.652
SRR1783600control5.623
SRR1783602moderate drought stress3.938
SRR1811619moderate drought stress3.903

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain14.312
DRR006520Root Summer glycyrrhizin high producing strain14.165
DRR006521Root Winter glycyrrhizin high producing strain1.740
DRR006522Root Winter glycyrrhizin high producing strain1.816
DRR006523Root Summer glycyrrhizin low producing strain25.632
DRR006524Root Summer glycyrrhizin low producing strain25.719
DRR006525Leaf Summer glycyrrhizin high producing strain9.159
DRR006526Leaf Summer glycyrrhizin high producing strain9.249

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)2.752
SRR2868004Drought Stress(Tissue:root)2.193
SRR2967015Control (Tissue:root)3.228

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave28.176
SRR9715740Leave30.086
SRR9715741Leave19.600
SRR9715739Root40.893
SRR9715742Root28.110
SRR9715743Root28.830

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h6.256
SRR8749028MeJA induced 9h5.152
SRR8749029MeJA induced 9h1.838
SRR8749030Uninduced6.081
SRR8749031Uninduced0.156
SRR8749032Uninduced0.561

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root4.417
SRR8400027Control-Root9.013

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved