Gene detail

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Gene detail information of Glyur000849s00021648.1

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT4G23180.1	1.00E-110	cysteine-rich RLK (RECEPTOR-like protein kinase) 10
NR	XP_003556004.1	0	PREDICTED: cysteine-rich receptor-like protein kinase 10-like isoform 1 [Glycine max]
COG	YP_004269132.1	5.00E-25	serine/threonine protein kinase [Planctomyces brasiliensis DSM 5305]
Swissprot	tr\|Q8GYA4\|CRK10_ARATH	2.00E-144	Cysteine-rich receptor-like protein kinase 10 (Precursor)
trEMBL	tr\|I1NG65\|I1NG65_SOYBN	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GLYMA20G27510.1}

Sequence

Transcript Sequence

>Glyur000849s00021648.1
AAAAATGGAAAAGATGAAGATGAAGATGAAGATGAAATTACGATCATTGAGTCGCTGCAATTCAACTTTGACACCATACGAGTTGCTACAAGTGACTTCTCTGATTGTAATAAAATTGGACAAGGTGGATTTGGAGCAGTTTACTGGGGTAAGCTCTCTAGTGGACAAGTTATTGCTGTCAAAAGATTGTCAGGGAAATCTGACCAAGGAGACATGGAATTTAAGAATGAAGTGCTTTTAGTGGCCAAGCTTCAACACCGAAATTTAGTTAGGCTACTTGGTTTCAGTTTGGAAAGAAATGAAAGGCTACTTGTTTATGAATTTGTTCCTAATAAAAGCCTCGATTACTTCATATTTGGTAATTCAACAATGAAAATACAATTGGATTGGAAAAGGCGCTACGACATTGTTAGAGGTATTGCTCGAGGACTTCTTTACCTACATGAGGACTCTCGATTGCGCATTATACATCGTGATCTCAAAGCAAGCAATATTCTCTTAGATGAAGAGATGAATCCAAAGATATCAGATTTTGGAATGGCAAAACTATTTGTTATGGATCAAACTCAAGGAAATACACGTAGAATTGTTGGAACCTATGGTTATATGGCACCTGAGTATGTAATGCGTGGACAGTTTTCAGTAAAATCGGATGTCTTTAGTTTTGGTGTACTAGTTCTTGAGATCCTAAGTGGCCAAAAAAACAATAAGGAGATTTGTCATGGGGAGAATGTGGAGTATCTACTGAGCTTTGCATGGAGAAACTGGAGGGAGGGAACACCTACAAATATTATAGATCCATCATTAAGCAACATTTCACAAAATGAAATGATGAGATGCATCCACATTGGTTTACTCTGTGTTCAAGAAAATTTAGTTGACAGACCAACCATGGCTACTATTGCACTCATGCTTAATAGTCATTCCCTCAGTCTCCCACTACCTTCGAAACCTGCGTTTTTTATGGGTAGTACAACTATAAGCTTTCAAGGCATGCAACCGCGGGATGATAATCCAGGGGCAACAAGATCTAGGGAATCCACATATAAATCAATTCAAGAATCAACAAATGAGGCTTCAATTACTGAGCCATACCCTCGC

Protein Sequence

Location information(JBrowse)

Scaffold	Start	End	Strand
Scaffold00849	110451	112097	-

Gene family

Gene family	subfamily
Protein Kinases Family	PPC:1.7.2

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process
GO:0006468 protein phosphorylation

molecular_function GO:0004672 protein kinase activity GO:0005524 ATP binding GO:0016772 transferase activity, transferring phosphorus-containing groups

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000849s00021648.1	PF00069.20	Pkinase	37	237	5.10E-47

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	0.000
SRR1783600	control	0.000
SRR1783602	moderate drought stress	0.000
SRR1811619	moderate drought stress	0.000

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	0.172
DRR006520	Root Summer glycyrrhizin high producing strain	0.268
DRR006521	Root Winter glycyrrhizin high producing strain	0.050
DRR006522	Root Winter glycyrrhizin high producing strain	0.025
DRR006523	Root Summer glycyrrhizin low producing strain	0.050
DRR006524	Root Summer glycyrrhizin low producing strain	0.050
DRR006525	Leaf Summer glycyrrhizin high producing strain	0.675
DRR006526	Leaf Summer glycyrrhizin high producing strain	0.635

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress(Tissue:root)	0.032
SRR2868004	Drought Stress(Tissue:root)	0.111
SRR2967015	Control (Tissue:root)	0.015

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leave	2.321
SRR9715740	Leave	0.980
SRR9715741	Leave	2.350
SRR9715739	Root	0.000
SRR9715742	Root	0.000
SRR9715743	Root	0.105

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	0.000
SRR8749028	MeJA induced 9h	0.000
SRR8749029	MeJA induced 9h	0.000
SRR8749030	Uninduced	0.088
SRR8749031	Uninduced	0.000
SRR8749032	Uninduced	0.000

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment-Root	0.119
SRR8400027	Control-Root	0.032