Gene detail information of Glyur000853s00029661.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT3G23580.15.00E-156ribonucleotide reductase 2A
NRKEH32208.10ribonucleoside-diphosphate reductase small chain [Medicago truncatula]
COGYP_006255029.11.00E-162ribonucleotide reductase subunit beta [Solitalea canadensis DSM 3403]
Swissprottr|P50651|RIR2A_ARATH0Ribonucleoside-diphosphate reductase small chain A
trEMBLtr|A0A072USZ2|A0A072USZ2_MEDTR0Ribonucleoside-diphosphate reductase small chain {ECO:0000313|EMBL:KEH32208.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold0085328887051+


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K10808RRM2 EC:1.17.4.1 Purine metabolism map00230
Pyrimidine metabolismmap00240
Glutathione metabolismmap00480
p53 signaling pathwaymap04115


Gene Ontology

biological_process

GO:0009186  deoxyribonucleoside diphosphate metabolic process

GO:0055114  oxidation-reduction process


molecular_function

GO:0016491  oxidoreductase activity


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000853s00029661.1PF00268.16Ribonuc_red_sm223001.50E-114


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control1.292
SRR1783600control1.351
SRR1783602moderate drought stress0.939
SRR1811619moderate drought stress0.977

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain4.434
DRR006520Root Summer glycyrrhizin high producing strain4.364
DRR006521Root Winter glycyrrhizin high producing strain37.410
DRR006522Root Winter glycyrrhizin high producing strain35.827
DRR006523Root Summer glycyrrhizin low producing strain7.766
DRR006524Root Summer glycyrrhizin low producing strain8.018
DRR006525Leaf Summer glycyrrhizin high producing strain5.678
DRR006526Leaf Summer glycyrrhizin high producing strain5.623

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)7.324
SRR2868004Drought Stress(Tissue:root)12.743
SRR2967015Control (Tissue:root)8.722

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave5.458
SRR9715740Leave14.375
SRR9715741Leave4.851
SRR9715739Root0.910
SRR9715742Root2.785
SRR9715743Root3.166

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h8.406
SRR8749028MeJA induced 9h23.411
SRR8749029MeJA induced 9h50.658
SRR8749030Uninduced20.031
SRR8749031Uninduced22.128
SRR8749032Uninduced65.327

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root4.903
SRR8400027Control-Root3.105

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved