Gene detail information of Glyur000858s00035416.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT4G11070.22.00E-10WRKY family transcription factor
NRXP_003526692.11.07E-74PREDICTED: probable WRKY transcription factor 53-like [Glycine max]
Swissprottr|Q9SUP6|WRK53_ARATH1.00E-12Probable WRKY transcription factor 53
trEMBLtr|I1KAM9|I1KAM9_SOYBN4.00E-75Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA06G13090.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold008589287494512+


Gene family

Gene familysubfamily
Transcription Factors FamilyWRKY


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0006355  regulation of transcription, DNA-templated


molecular_function

GO:0003700  transcription factor activity, sequence-specific DNA binding

GO:0043565  sequence-specific DNA binding


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000858s00035416.1PF03106.10WRKY26556.50E-08


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control0.753
SRR1783600control0.669
SRR1783602moderate drought stress0.640
SRR1811619moderate drought stress0.839

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain4.708
DRR006520Root Summer glycyrrhizin high producing strain3.640
DRR006521Root Winter glycyrrhizin high producing strain1.411
DRR006522Root Winter glycyrrhizin high producing strain1.419
DRR006523Root Summer glycyrrhizin low producing strain17.435
DRR006524Root Summer glycyrrhizin low producing strain14.824
DRR006525Leaf Summer glycyrrhizin high producing strain9.340
DRR006526Leaf Summer glycyrrhizin high producing strain10.351

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)0.335
SRR2868004Drought Stress(Tissue:root)2.009
SRR2967015Control (Tissue:root)1.284

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave114.668
SRR9715740Leave26.520
SRR9715741Leave145.645
SRR9715739Root5.290
SRR9715742Root32.303
SRR9715743Root25.316

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h4.696
SRR8749028MeJA induced 9h1.779
SRR8749029MeJA induced 9h1.535
SRR8749030Uninduced32.591
SRR8749031Uninduced2.900
SRR8749032Uninduced9.179

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root1.624
SRR8400027Control-Root4.756

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved