Gene detail information of Glyur000864s00030259.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G55730.1 | 2.00E-78 | myb domain protein 109 |
| NR | KHN20881.1 | 0 | Transcription factor MYB44 [Glycine soja] |
| Swissprot | tr|Q9FDW1|MYB44_ARATH | 7.00E-49 | Transcription factor MYB44 |
| trEMBL | tr|K7M582|K7M582_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA14G06870.2} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00864 | 81641 | 85614 | - |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | MYB |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000864s00030259.1 | PF00249.26 | Myb_DNA-binding | 49 | 94 | 1.00E-15 |
| Glyur000864s00030259.1 | PF00249.26 | Myb_DNA-binding | 101 | 145 | 1.30E-14 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.774 |
| SRR1783600 | control | 0.775 |
| SRR1783602 | moderate drought stress | 0.937 |
| SRR1811619 | moderate drought stress | 0.932 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 5.201 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 4.989 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 7.398 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 7.161 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 6.187 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 6.201 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 1.968 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 2.027 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 2.868 |
| SRR2868004 | Drought Stress(Tissue:root) | 4.778 |
| SRR2967015 | Control (Tissue:root) | 4.793 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 6.296 |
| SRR9715740 | Leave | 3.229 |
| SRR9715741 | Leave | 5.268 |
| SRR9715739 | Root | 2.547 |
| SRR9715742 | Root | 3.422 |
| SRR9715743 | Root | 3.687 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 8.523 |
| SRR8749028 | MeJA induced 9h | 5.608 |
| SRR8749029 | MeJA induced 9h | 5.872 |
| SRR8749030 | Uninduced | 10.050 |
| SRR8749031 | Uninduced | 5.366 |
| SRR8749032 | Uninduced | 5.854 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 3.626 |
| SRR8400027 | Control-Root | 4.647 |