Gene detail information of Glyur000865s00029160.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G69490.1 | 2.00E-85 | NAC-like, activated by AP3/PI |
| NR | KHN01256.1 | 8.81E-146 | NAC domain-containing protein 29 [Glycine soja] |
| Swissprot | tr|O49255|NAC29_ARATH | 4.00E-109 | NAC transcription factor 29 |
| trEMBL | tr|Q52QR5|Q52QR5_SOYBN | 4.00E-146 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA01G06150.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00865 | 99531 | 100893 | + |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | NAC |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000865s00029160.1 | PF02365.10 | NAM | 9 | 134 | 4.90E-52 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 2.024 |
| SRR1783600 | control | 1.594 |
| SRR1783602 | moderate drought stress | 4.191 |
| SRR1811619 | moderate drought stress | 3.865 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 1.609 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 1.108 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 61.533 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 61.101 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 1.171 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.944 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 7.080 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 7.297 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 23.156 |
| SRR2868004 | Drought Stress(Tissue:root) | 59.983 |
| SRR2967015 | Control (Tissue:root) | 84.175 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 42.441 |
| SRR9715740 | Leave | 23.456 |
| SRR9715741 | Leave | 73.111 |
| SRR9715739 | Root | 1.206 |
| SRR9715742 | Root | 5.328 |
| SRR9715743 | Root | 3.739 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 96.554 |
| SRR8749028 | MeJA induced 9h | 387.980 |
| SRR8749029 | MeJA induced 9h | 132.483 |
| SRR8749030 | Uninduced | 260.136 |
| SRR8749031 | Uninduced | 560.570 |
| SRR8749032 | Uninduced | 152.356 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 30.421 |
| SRR8400027 | Control-Root | 21.888 |