Gene detail information of Glyur000869s00032498.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT5G16000.10NSP-interacting kinase 1
NRXP_006574993.10PREDICTED: protein NSP-INTERACTING KINASE 2-like isoform X1 [Glycine max]
COGYP_001192956.12.00E-20two component regulator [Flavobacterium johnsoniae UW101]
Swissprottr|Q9LFS4|NIK1_ARATH0Protein NSP-INTERACTING KINASE 1 (Precursor)
trEMBLtr|K7K803|K7K803_SOYBN0Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA02G14160.2}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold008695511160731-


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:1.12.4


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005515  protein binding

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000869s00032498.1PF08263.7LRRNT_232719.00E-13
Glyur000869s00032498.1PF13855.1LRR_81231824.20E-09
Glyur000869s00032498.1PF00069.20Pkinase3055521.40E-31


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control24.750
SRR1783600control24.870
SRR1783602moderate drought stress27.044
SRR1811619moderate drought stress26.825

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain28.318
DRR006520Root Summer glycyrrhizin high producing strain26.951
DRR006521Root Winter glycyrrhizin high producing strain1.432
DRR006522Root Winter glycyrrhizin high producing strain1.355
DRR006523Root Summer glycyrrhizin low producing strain12.682
DRR006524Root Summer glycyrrhizin low producing strain12.260
DRR006525Leaf Summer glycyrrhizin high producing strain5.143
DRR006526Leaf Summer glycyrrhizin high producing strain4.802

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)123.860
SRR2868004Drought Stress(Tissue:root)115.741
SRR2967015Control (Tissue:root)123.654

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave11.264
SRR9715740Leave13.973
SRR9715741Leave18.082
SRR9715739Root18.800
SRR9715742Root37.299
SRR9715743Root33.159

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h10.131
SRR8749028MeJA induced 9h8.266
SRR8749029MeJA induced 9h2.549
SRR8749030Uninduced2.187
SRR8749031Uninduced0.288
SRR8749032Uninduced0.436

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root80.131
SRR8400027Control-Root75.098

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved